Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03206 ATGACGACGTCGTTTGCAGCAGCGGCGCTCAGAGACCCTAAGCTTCAGATCCCAACCTACCATGGCTTACGCTCTTCCTCCGCCGCATCTTCTCTCTCCCGCAATGCTCTCTCCATCCCTTCATCCACTCGCTCCTCCTCCCTCATACGCGCTGTTTCCACTCCTGCAAAGTCTGAAACAGTTACTGAGAAGAGGAGCAAGGTTGAGATATTCAAGGAACAGAGCAATTTCATAAGGTATCCTCTTAACGAGGATATGTTGAATGATGCGCCGAATTTAAGCGAAGCTGCAACTCAGTTGATCAAGTTTCATGGTAGTTATCAACAGTACAACAGAGACGAGCGTGGTTCGAGAACCTATTCGTTTATGATACGGACGAAGAACCCTTGTGGTAAGGTTTCGAATCAGCTTTACTTGACTATGGATGATCTTGCTGATCAGTTTGGAATTGGGACACTTAGATTGACTACTAGACAGACGTTTCAGCTGCATGGTGTTGTTAAGAAGGATCTTAAGACGGTTATGGGTTCTATTATTAGAAATATGGGGTCGAGTTTAGGTGCGTGTGGTGATCTTAATAGAAATGTGCTGGCTCCTGCTGCTCCGATTGTGAGGAAGGATTATCTCTTTGCTCAGGAAACTGCAGAGAATATTGCTGCACTGTTGACTCCTCAATCTGGTTTTTATTATGATGTTTGGGTAGATGGGGAAAGATTTATGTCAGCAGAACCGCCTGAGGTAGTTCAGGCACGAAATGATAATTCTCATGGTACAAACTTCACGGATTCACCTGAGCCCATATATGGAACTCAGTTCTTGCCAAGGAAATTCAAAATTGCAGTTACCGTGCCAACTGATAACTCTGTGGATATTCTCACAAATGATATTGGTGTTGTTGTTGTTACTGGTGATGATGGGGAGCCTCAAGGATTCAATCTTTATGTTGGTGGGGGGATGGGAAGAACACACAGGATGGAAACCACTTTTCCCCGCTTGGCTGAACCATTGGGTTACGTGCCAAAAGAGGATATTTTGTATGCAGTGAAAGCAATTGTTGTTACACAACGAGAAAACGGGAGAAGAGATGACCGCAGGTATAGTAGATTGAAATATCTGATCGACTCTTGGGGAATAGATAAGTTCAGAAATGAAGTCGAGCAATATTATGGCAAGAAGTTTGAACCTTTCCGCAGCTTGCCAGAATGGGAATTCAAAAGTTATCTTGGATGGCATCAGCAGGGCGATGGTGGTTTATATTGTGGGCTTCATGTTGACAATGGTCGTATTGCTGGAAAAATGAAAACGGCATTGAGGGAGGTTATTGAGAAGTATCATTTGAATGTTAGATTAACTCCAAATCAGAACATCATATTGACTGATATTCGAGCTGCATGGAAACGTCCCATCACAACCATTCTTTCTCAGGCTGGTCTGCTGCAACCTAGGTATGTAGATCCCCTTAATATAACGGCTATGGCATGCCCTGCTTTCCCATTATGTCCCCTGGCAATTACTGAAGCTGAACGTGGAATACCAAGTATTCTTAAGCGGATCCGTGACATGTTTGAGAAGGTTGGTCTGAAGTATAATGAATCTGTGGTTGTAAGGATAACTGGCTGTCCTAATGGTTGTGCTAGACCATATATGGCTGAACTTGGACTGGTTGGTGACGGCCCAAATAGCTACCAGGTTTGGCTTGGAGGCAGCAGTAACCAAACATCAATAGCGCGGAGTTTCATGGACAAGGTGAAGCTTCAAGACCTTGAAAAAGTTTTGGAGCCATTGTTTTATCATTGGAAGCAAAAGCGTAATTCTAAAGAATCATTTGGCGACTTTACAGTTCGACTGGGATTTGAGAAGCTTAAAGAATTCATTGAGAAATGGGAGGGTCCAGTAGTAGCACCAACAGCACGCCACAACCTGAAGCTTTTTACCGATAAAGAGACATACGAAGCAATGGATGGGTTAGCTAAGCTTCAAAACAAAAATGCTCATCAGTTGGCCATGGAAGTTGTCCGCAATTATATTGCTTCCAACCAAAATGGAAAAGGTGAAACATTTAATTGA 2067 0.4344 MTTSFAAAALRDPKLQIPTYHGLRSSSAASSLSRNALSIPSSTRSSSLIRAVSTPAKSETVTEKRSKVEIFKEQSNFIRYPLNEDMLNDAPNLSEAATQLIKFHGSYQQYNRDERGSRTYSFMIRTKNPCGKVSNQLYLTMDDLADQFGIGTLRLTTRQTFQLHGVVKKDLKTVMGSIIRNMGSSLGACGDLNRNVLAPAAPIVRKDYLFAQETAENIAALLTPQSGFYYDVWVDGERFMSAEPPEVVQARNDNSHGTNFTDSPEPIYGTQFLPRKFKIAVTVPTDNSVDILTNDIGVVVVTGDDGEPQGFNLYVGGGMGRTHRMETTFPRLAEPLGYVPKEDILYAVKAIVVTQRENGRRDDRRYSRLKYLIDSWGIDKFRNEVEQYYGKKFEPFRSLPEWEFKSYLGWHQQGDGGLYCGLHVDNGRIAGKMKTALREVIEKYHLNVRLTPNQNIILTDIRAAWKRPITTILSQAGLLQPRYVDPLNITAMACPAFPLCPLAITEAERGIPSILKRIRDMFEKVGLKYNESVVVRITGCPNGCARPYMAELGLVGDGPNSYQVWLGGSSNQTSIARSFMDKVKLQDLEKVLEPLFYHWKQKRNSKESFGDFTVRLGFEKLKEFIEKWEGPVVAPTARHNLKLFTDKETYEAMDGLAKLQNKNAHQLAMEVVRNYIASNQNGKGETFN 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03206 688 Pfam Nitrite and sulphite reductase 4Fe-4S domain 488 627 IPR006067 GO:0016491|GO:0020037|GO:0051536
Vivi5g03206 688 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 190 405 IPR045854 -
Vivi5g03206 688 Gene3D Sulfite Reductase Hemoprotein;Domain 2 120 191 - -
Vivi5g03206 688 Gene3D Sulfite Reductase Hemoprotein;Domain 2 398 481 - -
Vivi5g03206 688 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 487 636 IPR045854 -
Vivi5g03206 688 ProSitePatterns Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 538 554 IPR006066 GO:0016491|GO:0020037|GO:0051536
Vivi5g03206 688 Gene3D Sulfite Reductase Hemoprotein, domain 1 485 632 IPR045854 -
Vivi5g03206 688 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 408 480 IPR036136 GO:0016491
Vivi5g03206 688 Gene3D Sulfite Reductase Hemoprotein, domain 1 192 397 IPR045854 -
Vivi5g03206 688 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 411 464 IPR005117 GO:0016491
Vivi5g03206 688 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 119 175 IPR005117 GO:0016491
Vivi5g03206 688 FunFam Sulfite reductase [ferredoxin], chloroplastic 398 481 - -
Vivi5g03206 688 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 62 189 IPR036136 GO:0016491
Vivi5g03206 688 PANTHER SULFITE REDUCTASE [NADPH] SUBUNIT BETA-RELATED 30 632 IPR045169 GO:0016491|GO:0020037|GO:0051536
Vivi5g03206 688 Pfam Nitrite and sulphite reductase 4Fe-4S domain 215 393 IPR006067 GO:0016491|GO:0020037|GO:0051536
Vivi5g03206 688 FunFam Sulfite reductase [ferredoxin], chloroplastic 485 635 - -
Vivi5g03206 688 FunFam Sulfite reductase [ferredoxin], chloroplastic 189 398 - -
Vivi5g03206 688 NCBIfam sulfite reductase, ferredoxin dependent 56 628 IPR011787 GO:0020037|GO:0050311|GO:0051539
Vivi5g03206 688 PRINTS Sirohaem Fe-binding site signature 538 556 IPR006066 GO:0016491|GO:0020037|GO:0051536
Vivi5g03206 688 PRINTS Sirohaem Fe-binding site signature 489 507 IPR006066 GO:0016491|GO:0020037|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03206 K00392 - gmx:547693 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03206 5 121961674 121965967 Vivi5g03206 5 121961674 121965967 ECH