Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03195 ATGGCTTCAGTTGTACCCATTCTCCATAATCTCCTCAACCAAAATTCAAACCTCCCATCTCTCTCCCATTCTCAACAACCTCTTTTCTCAAGATCCACCAACCTCAAATCCAAATTCCTCATTCTTTCAAGAAAACCTAATAATCCACCAATATTGCTTCTCAAATGTTCGTCTTCCTCTTCCATGCTAAACAAACTAGAAGAAGAAGACGAAGATGAAGATGAAGAAGAGTTATCTCCACCACCTCCTCGGTTGAGCGATGTATGGGAAGAAATCCAAGGCAAGAACAACTGGGAAGGTTTGATAGATCCAATGGATCCTATTCTCCGGAAAGAAATCACTCGCTACGGCGAGTTTGCTCAAGCATGCTACGATTCATTCGACTTTGATCCACACTCAAAATACTGTGGAACCTGCAAGTATCATCCTTCGCATTTCTTCGATAAACTCGACATGGCTGAGAGTAGTGGATATACCATAACACGGTATCTTTATGCAACTTCAAACATTAACCTTCCTAACTTTTTCCAGAAATCTAAGATCTCTTCTGTATGGAGTACACATGCTAACTGGATGGGATACATCGCCGTTGCCACCGATGAAGAAGAAATTAAACGGTTAGGACGCCGGGACATAGTTATTGCATGGAGGGGCACAGTGACATACATAGAATGGATATACGACCTAAAAGACATTCTCCACGAAGCAAATTTCAGAAACGACCCATCCATCAAAGTAGAATTAGGCTTCTATGACTTATACACTAAAAAAGAAGACTCATGCAGCTACTGTACATTCTCAGCTCGAGAACAAGTCCTCTCAGAAGTAAAACGCCTCGTACAATACTACGAAGACGAAAAACTCAGCATCACAATCACAGGCCACAGTCTCGGCGCCGCATTAGCCATACTCAGCGCTTACGACATTGCTGAACTAAAACTAAATGTCATCGAAGACAACATCATCCCTGTAACCGTTTACTCATTCGCAGGCCCTAGGGTTGGGAATTTGCATTTCAAAGAAAGGTGCGATGAACTCGGTGTTAAAGTTTTGAGAATATTAAACGTGCATGACAAGGTTCCAACCGTGCCAGGGATAATAACCAACGAGAAGTTTCAGTTTCAGAAATATATAGAAGATGCTTTGTCTTTTCCTTGGAGTTATGCGCATGTTGGGACTGAGATTGCTTTGGATCATAGAGAGAGTCCTTTTTTGAAGCAGAATGGTGATCTGGGTTGTGCACATAATTTAGAGGTACTTTTGCATTTAATAGATGGGTATCATGGGAAAAAGAAAAAATTTGAGTTGGTTTCGAAGAGAGATATTGCGTTGGTGAATAAGAGTTGTGATTTTCTGCGGAGTGAGTATGGTGTACCGCCGCATTGGAGACAAGATGAGAATAAAGGGATGGTGAGAAGCGATGGGCGGTGGGTTTTGCCGGAACGGCCTCAGTTGGAAGCTCATCCGCCGGATACTGCACATCTTCTTAAGTTAGTGCTTAATTATCACATTCACGTTAATGGTAAGTTTCAATCATCATGA 1542 0.4196 MASVVPILHNLLNQNSNLPSLSHSQQPLFSRSTNLKSKFLILSRKPNNPPILLLKCSSSSSMLNKLEEEDEDEDEEELSPPPPRLSDVWEEIQGKNNWEGLIDPMDPILRKEITRYGEFAQACYDSFDFDPHSKYCGTCKYHPSHFFDKLDMAESSGYTITRYLYATSNINLPNFFQKSKISSVWSTHANWMGYIAVATDEEEIKRLGRRDIVIAWRGTVTYIEWIYDLKDILHEANFRNDPSIKVELGFYDLYTKKEDSCSYCTFSAREQVLSEVKRLVQYYEDEKLSITITGHSLGAALAILSAYDIAELKLNVIEDNIIPVTVYSFAGPRVGNLHFKERCDELGVKVLRILNVHDKVPTVPGIITNEKFQFQKYIEDALSFPWSYAHVGTEIALDHRESPFLKQNGDLGCAHNLEVLLHLIDGYHGKKKKFELVSKRDIALVNKSCDFLRSEYGVPPHWRQDENKGMVRSDGRWVLPERPQLEAHPPDTAHLLKLVLNYHIHVNGKFQSS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03195 513 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 39 483 - -
Vivi5g03195 513 SUPERFAMILY alpha/beta-Hydrolases 113 428 IPR029058 -
Vivi5g03195 513 FunFam Phospholipase A1-II 3 88 489 - -
Vivi5g03195 513 Gene3D alpha/beta hydrolase 88 491 IPR029058 -
Vivi5g03195 513 CDD Lipase_3 163 400 - -
Vivi5g03195 513 Pfam Lipase (class 3) 213 366 IPR002921 GO:0006629
Vivi5g03195 513 MobiDBLite consensus disorder prediction 63 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03195 Vivi-Chr5 121800865 121804581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03195 85 500 Acyl Lipid Metabolism Gene Families AT1G51440 75.000 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03195 - - tpra:123917669 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03195 5 121800865 121804581 Vivi5g03195 5 121800865 121804581 ECH