Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03194 ATGTCGATCGCTTTTTCCTTCGTCCCTCCTTCCTCCCATTCTCTTTCTTCTCATTCTCCTTCCACTCCCAAATCCCTCCCTCCCATTTCCTTCTCCTCTTCTTCTCTCCATCTCCGTCTCACTCCCTCTCCCTCTCCTTCTCTCCGCCTCAACCGCCGCGCAGATCCTCTCTTCATTCTCCATTCCACCGACTCCGGCGGAGGTTTCGGCGGTCACGACGATGGCGGCTCGTTCGGCGGACACGGTGGCGGCGGTGACGGAGACGCCAATGACGACGGAGAACACAATGACGGACATGGTGGACTTAACGAGGCGCTGTTGTTGTTGGCGCAAGCTGGTAGGTCGTTGGAGAGTGTGCCGGCTGACCTAGCTTCCGCTATCAAGGCAGGGAAGATTCCTGCCTCCGTTGTTGCAAGGTTTCTGGAGCTTGAGAAGTCTCCGCTCATGCAATGGTTGCTTAAGTTTACCGGTTTCAGAGAGCGGCTTCTCGCTGATGATCTCTTCCTTGCGAAGCTCGGTATGGAGTGCGGCGTTGGCGTCATTGCAAAGACTGCTGCTGAGTATGATCGCAGGAGAGAGAACTTTTTCAATGAGCTTGAAATCGTGTTCGCCGATGTGGTCATGGCTATACTTGCAGATTTCATGTTAGTTTATCTTCCTGCGCCTACTGTTTCTCTTAGACCACCACTTGGAGTTAGTGCAGGGGCTATTTCTAAATTTTTCCACAACTGCCCAGATAATGCATTCCAGGTTGCTCTCTCTGGAACATCATATTCCTTGTTGCAGAGATTTGGTGCAATTGTGCGTAATGGGTCCAAGCTTTTTGCAGTTGGAACTGGCGCATCACTGGTTGGGACAGCTGTGACGAATGCCTTAATTAATGCAAAGAAGGCTGTTAACAAGTCTTCTGCAGAGGAAATTGAAAATGTTCCCATATTGTCTACCAGTGCTGCTTATGGTGTTTATATGGCAGTTTCAAGCAATCTCAGGTACCAAGTTCTTGCGGGAGTTATTGAACAGAGGGTTCTAGAACCAATGTTGCACCAGCACAAACTTATACTTGGTGCTCTTTGTTTTGCTGTCCGAACCGGCAATACATATTTGGGTTCATTATTATGGGTGGATTATGCTCGTTGGATAGGAGTTCAGTAG 1152 0.4948 MSIAFSFVPPSSHSLSSHSPSTPKSLPPISFSSSSLHLRLTPSPSPSLRLNRRADPLFILHSTDSGGGFGGHDDGGSFGGHGGGGDGDANDDGEHNDGHGGLNEALLLLAQAGRSLESVPADLASAIKAGKIPASVVARFLELEKSPLMQWLLKFTGFRERLLADDLFLAKLGMECGVGVIAKTAAEYDRRRENFFNELEIVFADVVMAILADFMLVYLPAPTVSLRPPLGVSAGAISKFFHNCPDNAFQVALSGTSYSLLQRFGAIVRNGSKLFAVGTGASLVGTAVTNALINAKKAVNKSSAEEIENVPILSTSAAYGVYMAVSSNLRYQVLAGVIEQRVLEPMLHQHKLILGALCFAVRTGNTYLGSLLWVDYARWIGVQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03194 383 MobiDBLite consensus disorder prediction 69 98 - -
Vivi5g03194 383 Pfam Protein RETICULATA-related 160 337 IPR021825 -
Vivi5g03194 383 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 22 383 - -
Vivi5g03194 383 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03194 Vivi-Chr5 121737813 121741489 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03194 - - qsa:O6P43_020273 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03194 5 121737813 121741489 Vivi5g03194 5 121737813 121741489 ECH