Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03193 ATGGCACCTCACAAGCTCAATTCCAATTCCTCGGGAAATTCGAGTGTGTCGGCGTGTTCGCAGGCGGACAATGGTTTCATAAGTTCATTTTCTCTATTTCCTGAGAAAGCAGTGCAAGAGTTACTTCAATCGCCGGTCCAAGGGTCTGATGATCATCTTATAGAGTTCTCTGAATCTTTAAGAACCGTCGCGAAGGCTCTTAGGAAAGTTGCGGAAGGGAAAGCTTCTGCTCAAGCGGAGGCTGCTGAATGGAAACGGAAATATGAGTTGGAGAGGACTCGGAATCTGCAGTTTGAAGACAGAGGGAAATCATGCCTCGAGCCTTGTGCTGATCTTGATGATTTGAAAACAAATAACATCGCCAAACAACCCACATTATATAATAATGTAGCTAATGGGCTGTCTGAAGAATGTTGTTCTAGTAATGGTATTTGTTCCCATGAGGTGCTTAGGGATGGGAAACCTGATTCAGATTCCAAGATGGTCAGAAAGGCTTCTTTTAAACTTCAATGGTGCTGCAAAGGTGAGAAAAGTGATCAGCACAAACATGACATTGTCTCTTTTGAAAGAGGAAATATAACTACAGCTGAACGCAGTAGTAAGCAGATCTCTTTGACATGGGAGTCATCTCCACAGACAGTGCTCATATTGACCAAACCAAATTCAATTTCTGTTCAAATTCTGTGTGCTGAGATGGTTAGATGGTTGAGGCAGCATAAGAAACTACAAATATATGTTGAACCACGTGTCAAGGTGGATCTCTTGGCGGAGTCATCATACTTTAATTTTATAGAAACATGGAGTGATGATAAGGAAATTTTAAAGTTGCATACCAAAGTTGACCTTGTGATAACTCTTGGTGGAGATGGCACTGTTCTATGGACAGCATCTATGTTCAAAGGACCCGTGCCTCCTATTGTCCCCTTTTCTTTAGGGTCTCTTGGATTTATGACTCCTTTCTATAGTGAGAATTACAAAGAGTGCCTTGAATCAATTTTAAAGGGCCCCATTAGTATTACACTACGACACCGTTTGCTATGTCATGTTATACGAGATGCAGCTAAAGATGAACTTGAAACTGAAGAACCTATACTTGTTCTGAACGAGGTTACTATTGATCGTGGTATATCATCTTACCTCACAAATTTGGAATGTTACTGTGACAACTCCTTTGTCACATGTGTGCAAGGGGATGGATTAATCTTATCTACGACATCCGGTAGTACTGCATATTCTTTGGCAGCTGGAGGATCAATGGTCCACCCTCAGGTTCCAGGTATTTTGTTTACACCAATTTGCCCACATTCTCTCTCTTTTAGGCCATTGATATTACCAGAGCATGTGACTTTAAGGGTGCAAGTTCCATTCAATAGCAGAAGCCCAGCATGGGCATCATTTGACGGCAAAGACAGGAAGCAGTTAGCACCAGGAGATGCATTAGTGTGCAGCATGGCACCCTGGCCCGTTCCTACAGCTTGTCTGGTCGATTCTACTAACGACTTCTTACGCAGTATTCACGAGGGTCTTCATTGGAATTTGAGAAAGACACAGTCGTTTGACGGACCCCGCGAATCCTGA 1578 0.4271 MAPHKLNSNSSGNSSVSACSQADNGFISSFSLFPEKAVQELLQSPVQGSDDHLIEFSESLRTVAKALRKVAEGKASAQAEAAEWKRKYELERTRNLQFEDRGKSCLEPCADLDDLKTNNIAKQPTLYNNVANGLSEECCSSNGICSHEVLRDGKPDSDSKMVRKASFKLQWCCKGEKSDQHKHDIVSFERGNITTAERSSKQISLTWESSPQTVLILTKPNSISVQILCAEMVRWLRQHKKLQIYVEPRVKVDLLAESSYFNFIETWSDDKEILKLHTKVDLVITLGGDGTVLWTASMFKGPVPPIVPFSLGSLGFMTPFYSENYKECLESILKGPISITLRHRLLCHVIRDAAKDELETEEPILVLNEVTIDRGISSYLTNLECYCDNSFVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEHVTLRVQVPFNSRSPAWASFDGKDRKQLAPGDALVCSMAPWPVPTACLVDSTNDFLRSIHEGLHWNLRKTQSFDGPRES 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03193 525 Hamap NAD kinase [nadK]. 212 511 IPR002504 GO:0003951|GO:0006741
Vivi5g03193 525 FunFam Probable NAD kinase 1 202 368 - -
Vivi5g03193 525 FunFam probable NAD kinase 1 344 487 - -
Vivi5g03193 525 Gene3D - 201 512 IPR017438 -
Vivi5g03193 525 Pfam ATP-NAD kinase N-terminal domain 214 335 IPR002504 GO:0003951|GO:0006741
Vivi5g03193 525 PANTHER NAD KINASE 57 518 - -
Vivi5g03193 525 Coils Coil 74 94 - -
Vivi5g03193 525 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 213 517 IPR016064 -
Vivi5g03193 525 Pfam ATP-NAD kinase C-terminal domain 367 484 - -
Vivi5g03193 525 Gene3D - 344 487 IPR017437 GO:0003951|GO:0019674
Vivi5g03193 525 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03193 Vivi-Chr5 121723666 121729200 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03193 K00858 - gmx:100806276 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03193 5 121723666 121729200 Vivi5g03193 5 121723666 121729200 ECH