Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03182 ATGTTTTGGTTGAGACCTATTTTGCGTTCACAACCAAGATCTTCCATTTGGGCATTACACCATTCTTCCTTTTCCACTTCCTCACCCGCTGCAATTCAAGCTGAGAAAACCATTCAACATGGACCCAGAAACGATTGGACTAAAGAAGAAGTCAAATCCATCTACGACTCTCCCATTCTCGATCTTCTCTTCCATGGGGCTCAGGTTCACAGACATGCTCATAACTTTAGGGAAGTGCAGCAGTGTACTCTTCTATCTGTGAAAACAGGTGGGTGTAGTGAGGATTGTTCTTATTGTCCTCAATCCTCTAGGTATGATACAGGACTCAAAGGTCAGAGACTTATGAACAAAGAGGCTGTTCTTAAAGCTGCAGTCAAGGCAAAAGAGGCTGGGAGTACTCGCTTTTGTATGGGCGCTGCATGGAGGGATACAATAGGAAGAAAGACAAACTTCAACCAGATACTTGAATATGTAAAAGAAATAAAGGGTATGGGGATGGAGGTGTGTTGCACCCTTGGCATGCTCGATAAAGATCAAGCCGGTGAGCTCAAGAAGGCGGGTCTTACTGCCTATAATCACAATCTTGACACTTCCAGGGAATACTATCCAAACATCATCACAACAAGGAGTTATGATGAGCGCTTGCAAACTCTTGAATATGTTCGTGATGCAGGGATTAATGTTTGCTCTGGTGGAATTATCGGGCTCGGAGAAGCTGAGGAAGACCGTGTAGGTTTGCTACATACATTATCAACACTTCCTACACATCCAGAGAGTGTTCCTATTAACGCACTTGTTGCTGTCAAGGGAACCCCTCTTCAGGATCAGAAGCCTGTTGAAATATGGGAGATGATTCGCATGATTGCGACAGCGCGTATAACAATGCCAAAAGCAATGGTGAGGTTATCAGCCGGCAGGGTTCGGTTCTCCGTGCCTGAACAGGCCTTGTGTTTTCTTGCTGGTGCCAATTCTATCTTTGCTGGTGAAAAGCTTCTCACAACTGCTAACAATGATTTTGATACCGATCAACTCATGTTTAAAGTTCTCGGTCTTCTTCCAAAAGCTCCAACCTTAGAAGAAGATGAAACTAGCGAGACAGAGAACTATAAAGAAGCTTCTTCTTCTAGCTAA 1131 0.4403 MFWLRPILRSQPRSSIWALHHSSFSTSSPAAIQAEKTIQHGPRNDWTKEEVKSIYDSPILDLLFHGAQVHRHAHNFREVQQCTLLSVKTGGCSEDCSYCPQSSRYDTGLKGQRLMNKEAVLKAAVKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKEIKGMGMEVCCTLGMLDKDQAGELKKAGLTAYNHNLDTSREYYPNIITTRSYDERLQTLEYVRDAGINVCSGGIIGLGEAEEDRVGLLHTLSTLPTHPESVPINALVAVKGTPLQDQKPVEIWEMIRMIATARITMPKAMVRLSAGRVRFSVPEQALCFLAGANSIFAGEKLLTTANNDFDTDQLMFKVLGLLPKAPTLEEDETSETENYKEASSSS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03182 376 Pfam Biotin and Thiamin Synthesis associated domain 261 351 IPR010722 -
Vivi5g03182 376 NCBIfam biotin synthase BioB 45 351 IPR002684 GO:0004076|GO:0009102
Vivi5g03182 376 SUPERFAMILY Radical SAM enzymes 44 353 - -
Vivi5g03182 376 SMART MiaB 82 290 IPR006638 GO:0003824|GO:0051536
Vivi5g03182 376 CDD Radical_SAM 89 289 - -
Vivi5g03182 376 Hamap Biotin synthase [bioB]. 44 354 IPR002684 GO:0004076|GO:0009102
Vivi5g03182 376 SMART BATS_2 261 353 IPR010722 -
Vivi5g03182 376 SFLD BATS domain containing 38 359 - -
Vivi5g03182 376 PIRSF Biotin_synth 27 360 IPR024177 -
Vivi5g03182 376 MobiDBLite consensus disorder prediction 357 376 - -
Vivi5g03182 376 ProSiteProfiles Radical SAM core domain profile. 77 306 IPR007197 GO:0003824|GO:0051536
Vivi5g03182 376 Gene3D Aldolase class I 43 355 IPR013785 -
Vivi5g03182 376 Pfam Radical SAM superfamily 88 247 IPR007197 GO:0003824|GO:0051536
Vivi5g03182 376 SFLD biotin synthase 38 359 IPR024177 -
Vivi5g03182 376 FunFam Biotin synthase 43 356 - -
Vivi5g03182 376 PANTHER BIOTIN SYNTHASE 24 374 IPR002684 GO:0004076|GO:0009102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03182 Vivi-Chr5 121556218 121558958 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03182 K01012 - gmx:100808225 647.891