Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03150 ATGGCAGCTACTAGCACTTGTTTGACCTTGACAATATTGGTGGTTTTTGGAACATTATTCTATAACACAAACAATGTTTCAGCTCAATGTGGATTTACGGCTCTAATTCATAAGTGTTCTAAGTTTGTTGAGACACCTGGACCAACAATTCCACCATCACCAGAATGTTGTGCAGCCATAAAAAGCTTTGATCTTCCATGTGCTTGTAAGCTTTTCACTAAAGAATCTGAAAAGTTTGTTAGTATTCAAAAGACGATATTTGTTGCAAGGTCTTGTGGATTGAAAGTTCCTCCAGGAATGCAATGTGGATCTGTGAAAGTGCCTCCAAAAGCAATGAAGTGA 342 0.3801 MAATSTCLTLTILVVFGTLFYNTNNVSAQCGFTALIHKCSKFVETPGPTIPPSPECCAAIKSFDLPCACKLFTKESEKFVSIQKTIFVARSCGLKVPPGMQCGSVKVPPKAMK 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03150 113 Gene3D - 29 100 IPR036312 -
Vivi5g03150 113 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 36 102 IPR036312 -
Vivi5g03150 113 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 9 110 - -
Vivi5g03150 113 Pfam Probable lipid transfer 13 102 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03150 Vivi-Chr5 120842149 120842658 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03150 9 108 Acyl Lipid Metabolism Gene Families AT4G33550 38.679 1.46e-22 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03150 - - cam:101501404 162.925