Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03144 ATGGTCAGAAAACACGGCTGGCAATTACCAGCACACACTTTTCAGGTTGTTGCAATCACTGTATTCTGCTTGTTGGTGATTGCTTTCTATGCTTTCCTTGCACCGTTTGTTGGAGGTCATATATGGGAATACACCTTTATCGGTGTCTACTCTCCTGTGGCACTCATTGTTTTTATTCTTTATGCCAGATGTACTGCAATTAACCCTGCAGATCCAGGCATTATGTCTAAATTTGACCCTAGAATGGGAGATATGTTCGACCCTGCCCATGGGTTGTTGGGTAAGCATCAATCTTCTGAACGCGGTGATGTTGCTGCAGGAGAGAATTCCTCCCTGTCATCTGCTGTTTCCAAAAGGTCTATGACAAATATGAGCAAGAAAAGTTCAGTGGAAGATCCTGACAGAGTAGATGATTTGAGAAATCAGTATAAACCAAGCTCATGTGATGTAATTGGGGGAATTTGCTGCATACTATTTTCTCATGAAGATTGCCGAAAACAGGAAACAGCTGATGAGCAGGGCGGCGGGGAAGATGCTCTGTTCTGCACTTTGTGCAATTCTGAGGTGCGCAAGTTCAGTAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGCTTCGATCACCATTGTCGGTGGCTTAACAACTGCGTGGGTCAGAAAAATTACCATTCTTTTATTTCTCTTATGGCCTTTAGTCTTGCATGGCTTGTTATTGAAGCTGGAGTCGGTATTGCTGTTTTAGTGCGTTTCTTTGTTAATAAGAGAGGAATGGAATCTGAAATCATTGATAGACTTGGAAATGGATTCTCTCGTCCCCCGTTTGCTGCAGTTGTGGTCGTATGTACTGCAGTTTCGGTCTTGGCTTGTGTGCCTTTGGGTGAGCTTTTCTTTTTCCACATGATCCTAATCAGGAAGGGTATCACAACATATGAGTATGTTGTAGCAATGAGAGCCATGAGCGAAGCACCTCCAGGGGCATCTGTGGATGGGGATTTGCCAAATATACTTTACTCTCCAACTGGCTCAGCAACAACTGGATTGAGTGGAGGAAGTTCTCTTGGATTGCAGTACAAAGGGGCGTGGTGTACCCCTCCTAGGGTATTTGTCGACTATCAGGATGAAGTTGTGCCTCACTTGGAGCCTGGAATGCTGCCATCAACTGTTGATCCAGATGCAGCTGGGTTTGCAGAAAGAGGGCAAAAGATGCCAAAAAGGCCTGTTCGTATTAGTGCTTGGAAGCTTGCTAAATTGGATTCTCAAGAGGCAGCGAGAGCAGCGGCTAAAGCCAGGGCATCTTCTTCAGTTTTGCGACCTGTAGATAGCCATCGTCCACCTGATGCAGAATTAAGCTCTAGTGGAAACATGAGCATCAGAAGTAGTATGAGTATAGATACTGGAATTAATAAGGAAGTAAAACACGAGTTAAGATTGTCTCCAGTGGGGAATTTGATTGCTCCTAGTCAAGGAAGCCGTGACGAGTATGAAACTGGAACTCAAAGTATGAGTAGTTTCAGTAGTCCAAGCCATGCTCAAGAGGCAGTTACTCTCAGCCCTCTTCCCCAGGGGCGTACTTTGGGTGGCTTCAGGGCTGGTATTTCAGTTCCTAGTTTGGTGCCTGAGCGTCCTTTAACTTCTAAAGCCACATTGCCAAACTTCAGGAACCCAATATCCAATCCGTCTCATGGATTCGATGGAACAATGATGCTGAAGGGAGCAAGTAACGACCCGTTACTGCTTTCAGCTTCCAGCACATCGATTCTAAGAGATGTGAAACGGACATCAGTTGTTTGGGATCAAGAAGCCGGCCGATATATCTCAGTTCCTTCATTGCCTTCAGAAGCTCGAAATAGGTCATCTCTGCAAACAGAAATGCCAAATTCAAATACTGAAACAAGCAGTATTGGAAGGAAACCAATGATACCTCCACAGGAACCGGGGTCATCTGCACCTAAATCTCCAAGGCAGCATGCACAGAATCTGACGTATACAGGAGAGTCTATCTTTTTTGGTGGTCCATTTTTGAGTGTGGCTGCTAAAGATGGTTTGAAAAATGAAAGATCAGTAGAGGCTCATGATAGCATAGCAGTAAACTTACCCCAAGAACCAAGATATAGAAGAGATTCACATTCAAATCAACTTCCAGTGTTTGTTCCTGGTGGTTTTGATAATGCTCTTCAACCTCGGCCGGGTATGAATTAG 2199 0.4438 MVRKHGWQLPAHTFQVVAITVFCLLVIAFYAFLAPFVGGHIWEYTFIGVYSPVALIVFILYARCTAINPADPGIMSKFDPRMGDMFDPAHGLLGKHQSSERGDVAAGENSSLSSAVSKRSMTNMSKKSSVEDPDRVDDLRNQYKPSSCDVIGGICCILFSHEDCRKQETADEQGGGEDALFCTLCNSEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGQKNYHSFISLMAFSLAWLVIEAGVGIAVLVRFFVNKRGMESEIIDRLGNGFSRPPFAAVVVVCTAVSVLACVPLGELFFFHMILIRKGITTYEYVVAMRAMSEAPPGASVDGDLPNILYSPTGSATTGLSGGSSLGLQYKGAWCTPPRVFVDYQDEVVPHLEPGMLPSTVDPDAAGFAERGQKMPKRPVRISAWKLAKLDSQEAARAAAKARASSSVLRPVDSHRPPDAELSSSGNMSIRSSMSIDTGINKEVKHELRLSPVGNLIAPSQGSRDEYETGTQSMSSFSSPSHAQEAVTLSPLPQGRTLGGFRAGISVPSLVPERPLTSKATLPNFRNPISNPSHGFDGTMMLKGASNDPLLLSASSTSILRDVKRTSVVWDQEAGRYISVPSLPSEARNRSSLQTEMPNSNTETSSIGRKPMIPPQEPGSSAPKSPRQHAQNLTYTGESIFFGGPFLSVAAKDGLKNERSVEAHDSIAVNLPQEPRYRRDSHSNQLPVFVPGGFDNALQPRPGMN 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03144 732 MobiDBLite consensus disorder prediction 608 656 - -
Vivi5g03144 732 MobiDBLite consensus disorder prediction 429 459 - -
Vivi5g03144 732 MobiDBLite consensus disorder prediction 482 508 - -
Vivi5g03144 732 ProSiteProfiles DHHC domain profile. 180 230 - -
Vivi5g03144 732 MobiDBLite consensus disorder prediction 103 127 - -
Vivi5g03144 732 MobiDBLite consensus disorder prediction 483 508 - -
Vivi5g03144 732 MobiDBLite consensus disorder prediction 699 732 - -
Vivi5g03144 732 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 22 316 - -
Vivi5g03144 732 Pfam DHHC palmitoyltransferase 179 314 IPR001594 GO:0016409
Vivi5g03144 732 MobiDBLite consensus disorder prediction 96 137 - -
Vivi5g03144 732 MobiDBLite consensus disorder prediction 611 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03144 Vivi-Chr5 120749236 120755903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03144 181 311 Lipid Metabolism Gene Families AT4G22750 29.008 3.46e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03144 K20027 - gmx:100805779 1201.81