Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03139 ATGGAAGAAGAGACAAAAGTCATTTCGGAAGTTCCAGTGACAAAGGTTGTTGAAGTGGATCACAAAGATTTTGACATTAAGAAAACCAATGGAGACTTGCCGGCCAAGGAAATAGCCGAAGGAAAGAAAGACGAGGAAGATAATGCCTCGGATGGAGAGTTCATTAAAGTCGAGAAGGAAGAGAATGTGGCTGACGAAACGTCCAACAAAACTGAAAGAAGCTCAGAACCTCCTAGCAGAGAGTTTCTTGAAGCGCAAGAGAAGGTTCGGGAACTCGAGGTTGAAGTGAAAACACTCGCTGAATCTTTGAAGACATCTGAACATGAAAACGCTGCGCTGAAGGGAGAGGTCTCGGAAACAAAAGAGAAACTGAAAGAAAGCGGAAAGAAAACCGAAGAGCTTGAAGTAAGTCACAAGAAATTGCAAGAGCAGATTGTTGAAGCCGAGAACAAGTACAATCTGCAGGCCAGCACTCATGAAGAGGCTCTGCGAAGTCAAGAAGTTAAGCAGAAAGAGATTCTTGAAGTGAAGGAAGCGTTTGATGATCTGAACGTCAAGCTTGAGAGCTCCCGAAAGAAGACGCAGGAGTTGGAGCATGAGCTGCGAGTTTCTAAGGATGAGGCGCAGAAATTCGAGGAGCTGCATAAGCAAAGCATTTCGCAGGCTGAATCTGAGGGAAACAAGGTGATCGAATTTGAGAGACTACTTGAAGAAGCGAAATCGAGTGCGAAAGGCTTGGAAAATGAGATTGCTTCGCTGAAGGAAGAATTGAAGGGAGTTAATGATAAGGTCGCTGAAAAGGAAAAGGTTGAAGAAGCACTTAAAACAACTGCAGCTGAACTCTCTACCATCCAAGACGAATTGGCACTCTCCAAAACACAGGTATCAGAAGTTGAGCAAAGACTGTCGTCAAGAGACTCGCTAGTAGACGAGTTGACGAAGGAATTAAACCTGATAAAGACTTCGGAAACACAGATAAAAGAAGACTTGTCAGCACTGCAAAACCTATTTGTTTCTACGAAGGAAGAGCTAAAAGAAAAAGATTCCGAGTTGGAAAGCGCAAGGCTCAAGCTGCAGGAGGAAGAAACATCCAGAGAATCAATTCAAGTTTCATTCAAGAGCCAGGAAGCACAGTTTCTATCGGTACAAGAGGAACTGACTAAGCTCAATGCAGAGAAAAAGAGACTCGAGGAAACTTTTGAAGATCTAACCGTTAATGCGAAACACTTTAAGGAGTTGTCTGCTGATTTAGAGGAGAAACTGAAGCTTTCGGAGGAAAACTTTAGTAAAACAGATTCTCTTTTATCTCAGGCGCTTTCGAACAACTCAGAGCTGGAGCTGAAGGTGAAGTCCTTGGAAGATCTTCATAATGAAGCTGGATCTGTCGCAGCTACTGCGACTCAAAGGAGTATTGAGCTCGAGGGACATGTTGAAGCTACAAATGCAGCTGCAGAAGAGGCAAAATCTCAGCTACGAGAGCTCGAAACACGCTTCATAACAGTAGAGCAGAAGAATGTTGAGCTTGAGCAACAATTGAATTCAGTGCAATCGAAAGCCAGCGAAGCTGAGAGAGACGTGATTGAATATTCCGAGAAAATTTCTCACCTCGATGCTAAATTGAAAGAGGCCGAGGAAGCGAAGAATCTTCTTAATGGCCTACTTCAGGAGCACACGGATAAGGTAAGTCAACTTGAATCAGATTTAAATCAATCAATCAAGCAGAAATCGCAATTGGAGGAGGAGCTGAAGAAACTCACTGACAAATGTTCTGAGCATGAAGATCGAGCCACCTCATACAATCAACGCAGCCTAGAACTAGAAGATTTAATTCAGAGCTCTCATTCAAAATCGGAAAGTGCTGAAAAGAGAGTGAGTGAGTTGGAGTTGCTACTTGAAACCGAGAAATACAGAATTCAAGAACTCGAACAACAAACAAGCGCATTAGAAAAGAAATATAATGATTCAGAAGAAAACTCCAATAAACATCTTGAAAATGTGTCTTATCTTACATCAGAACTCGAAGTGTTTCAAGCACGAACCTCAACCCTTGAAAGTTCACTGCAAGAAGCGAATGAAAGGGAAAAAGAGTTGAAAGATTCTTTAAATGCTGCGACGGATGAAAAGAAAAAGTTAGAAGATTCTTTAAACAGTTTGAGCGAGAAGTTCTCCGAGGCAGAAAACCTATTGGAAATTGTGAGGGATGATTTAAATCTCACACAAGTTAAGTTGCAAAACACTGAAAATGATCTCAAGGCTGCTGAACTGAGAGAGAGCGAGATAAGAGAAAAACTTAATGCTACTGAAGAACATCTTGTTGTAAAGGGAAGAGATATAGAGCATACTACTGCTAGAAACTTAGAACTCGAATCGTTACATGAATCTGTTACAAGAGATTCCGAACAGAAGCTCCAAGAAGCTATTGAAAAATTCAACAGCAAAGATTCTGAGGTTCAATCTCTTCTTGAGAAAATCAAGATTCTGGAGGAGAATATCGCGGGAGCAGGTGAAGAGTCTGCATCTTTGAAGAGTGAATTTGAAGAGAGTTTGAGCAAACTCGCTTCTTTACAAAGCGAAAACGAAGATTTGAAAACGAAAATTATTGAAGCTGAGAACAAGACTTCACAGTCGTTTTCTGAGAATGAATTACTGGTTGGAACAAACACTCAACTGAAATCAAAGATCGATGAACTTCAAGAGTCACTGAATAGTGTTCTATCAGAGAAAGAAGTCACTGCTCAAGAGCTTGTTTCGCATAAGAGCTTAGTAGCTGAACTGAATGATGTACAATCAAAATCTTCCGCAATTCATTCTACCAATGAAGCTCGCATTCTTGAATTAGAATCCCAGTTACAAGAAGCTTTGCAGAAGCACACTGAGAAGGAATCAGAAACCAAAGAATTGAACGAGAAGCTGAATACTCTAGAAGGACAGATAAAGTTATACGAAGAACAGGCACGGGAAGCTGCTGCAACGTCTGAAACTCGTAAAGCTGAGCTTGAGGAGAATCTCGTAAAATTAAAGCATCTTGAAACAGTTCTTGAGGAGCTACAAAACAAGTCACTCCACCATGAAAAAGAATCTGCTGGAGTAAAGGAGGAAAATTCAAAACTTGTTCAGGAAATCGCTGTCTATGAATCCAAATTAACTGATTTACAGTCAAAGCTCACTGCAGAAGTTGCCGAGAAGGATAAGATATTTAACGAGACACTCTCATTGAAGAACGCCGCGGAAGACTTGGTGACAAAGCTCAGTGAGGAAGTACAGACATTAAAGTCACAGATATCTTCGGCAATAGACGAGAAGAACTTGCTCAATGAGACTAATCAGAGTTTAAAGAAGCAACTTGAGTCTATGATACTTGACCTTGAAGAAAAGTTGAAGGAGCATCAGAAAAATGAAGACTCTTTGAGATCTGAGGTTGAAACACTCAAAGTTGAGATTGCTGAGAAATCTGTATTGCAAAGTCGGCTCCAGGAAATTGAAGCGCAACTCGTGAAAGCTGAATCTAGACTACATGAAGAGGTTGGAAGTGTTCAAGCTGCTGCCTCTCAAAGAGAAGCTGATTTGAGTTCAAAATTTACAGATTATGAACAAAAAATCAATGAAATAAATGTTCTGAATGGAAAGGTGGTAGAACTTGAGAAAGAGTTGCAACTTGCACAGGCTGCTATAGCTAATCAGAAAGGAGCAGAATCTCAGAAGTTGGAACTAGAGGCAGCCTTGAAGAAATCTCTAGAAGAACATGAAACTAAGAAAAATGAAATCTCTCTTCTACAAAAACAAGTACTAGATTTTGAGGAGAAATCGCAACAGGATAGCGAGAAAATCTCACTCAAGGGTGAGGAGAGTGTTGGTAAAAAGGACGAGTTGGAAGTGAAATCCCGAGACTTTAACATCTCGACTCCAACGAAAAGGAAGAGCAAGAAAAAGTCAGAAGCAACAACTGCTCAGGCATCAACTTCTTCGGCCGAGCCTCAAACTCAAACCGGCCAGGACTCGCCTTTCATGAATTTGAAGTTCATCCTTGGAACTGCTATTGTGTCGATTATCTTCGGCATAATTCTTGGAAAACGTTATTAA 4080 0.4096 MEEETKVISEVPVTKVVEVDHKDFDIKKTNGDLPAKEIAEGKKDEEDNASDGEFIKVEKEENVADETSNKTERSSEPPSREFLEAQEKVRELEVEVKTLAESLKTSEHENAALKGEVSETKEKLKESGKKTEELEVSHKKLQEQIVEAENKYNLQASTHEEALRSQEVKQKEILEVKEAFDDLNVKLESSRKKTQELEHELRVSKDEAQKFEELHKQSISQAESEGNKVIEFERLLEEAKSSAKGLENEIASLKEELKGVNDKVAEKEKVEEALKTTAAELSTIQDELALSKTQVSEVEQRLSSRDSLVDELTKELNLIKTSETQIKEDLSALQNLFVSTKEELKEKDSELESARLKLQEEETSRESIQVSFKSQEAQFLSVQEELTKLNAEKKRLEETFEDLTVNAKHFKELSADLEEKLKLSEENFSKTDSLLSQALSNNSELELKVKSLEDLHNEAGSVAATATQRSIELEGHVEATNAAAEEAKSQLRELETRFITVEQKNVELEQQLNSVQSKASEAERDVIEYSEKISHLDAKLKEAEEAKNLLNGLLQEHTDKVSQLESDLNQSIKQKSQLEEELKKLTDKCSEHEDRATSYNQRSLELEDLIQSSHSKSESAEKRVSELELLLETEKYRIQELEQQTSALEKKYNDSEENSNKHLENVSYLTSELEVFQARTSTLESSLQEANEREKELKDSLNAATDEKKKLEDSLNSLSEKFSEAENLLEIVRDDLNLTQVKLQNTENDLKAAELRESEIREKLNATEEHLVVKGRDIEHTTARNLELESLHESVTRDSEQKLQEAIEKFNSKDSEVQSLLEKIKILEENIAGAGEESASLKSEFEESLSKLASLQSENEDLKTKIIEAENKTSQSFSENELLVGTNTQLKSKIDELQESLNSVLSEKEVTAQELVSHKSLVAELNDVQSKSSAIHSTNEARILELESQLQEALQKHTEKESETKELNEKLNTLEGQIKLYEEQAREAAATSETRKAELEENLVKLKHLETVLEELQNKSLHHEKESAGVKEENSKLVQEIAVYESKLTDLQSKLTAEVAEKDKIFNETLSLKNAAEDLVTKLSEEVQTLKSQISSAIDEKNLLNETNQSLKKQLESMILDLEEKLKEHQKNEDSLRSEVETLKVEIAEKSVLQSRLQEIEAQLVKAESRLHEEVGSVQAAASQREADLSSKFTDYEQKINEINVLNGKVVELEKELQLAQAAIANQKGAESQKLELEAALKKSLEEHETKKNEISLLQKQVLDFEEKSQQDSEKISLKGEESVGKKDELEVKSRDFNISTPTKRKSKKKSEATTAQASTSSAEPQTQTGQDSPFMNLKFILGTAIVSIIFGIILGKRY 1359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03139 1359 Coils Coil 435 455 - -
Vivi5g03139 1359 SUPERFAMILY Tropomyosin 610 854 - -
Vivi5g03139 1359 Coils Coil 372 427 - -
Vivi5g03139 1359 Coils Coil 673 770 - -
Vivi5g03139 1359 Coils Coil 337 364 - -
Vivi5g03139 1359 Gene3D - 428 574 - -
Vivi5g03139 1359 PANTHER EARLY ENDOSOME ANTIGEN 1 1359 - -
Vivi5g03139 1359 Coils Coil 477 602 - -
Vivi5g03139 1359 MobiDBLite consensus disorder prediction 26 84 - -
Vivi5g03139 1359 Coils Coil 624 658 - -
Vivi5g03139 1359 Pfam Ezrin/radixin/moesin, alpha-helical domain 500 601 IPR046810 -
Vivi5g03139 1359 MobiDBLite consensus disorder prediction 1274 1312 - -
Vivi5g03139 1359 Coils Coil 887 914 - -
Vivi5g03139 1359 Coils Coil 1073 1177 - -
Vivi5g03139 1359 Coils Coil 82 158 - -
Vivi5g03139 1359 SUPERFAMILY Tropomyosin 442 608 - -
Vivi5g03139 1359 Coils Coil 803 872 - -
Vivi5g03139 1359 MobiDBLite consensus disorder prediction 101 136 - -
Vivi5g03139 1359 MobiDBLite consensus disorder prediction 1274 1332 - -
Vivi5g03139 1359 Coils Coil 936 1054 - -
Vivi5g03139 1359 Coils Coil 229 301 - -
Vivi5g03139 1359 MobiDBLite consensus disorder prediction 1313 1332 - -
Vivi5g03139 1359 Coils Coil 1196 1268 - -
Vivi5g03139 1359 Coils Coil 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03139 Vivi-Chr5 120683732 120690803 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03139 - - mtr:11442834 2006.88