Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03123 ATGAGAGGAGTAAGAATGCACAGAAAAACAGACTCCGAAGAAACCACCAACAGCAATGAACAATCCTCCTCCACTCCGCCGCGTTCCCCTTCCCGGCGACCACTTTACTACGTCCAAAGCCCTTCAAACCACGACGTCGAGAAAATGTCTTACGGTTCAAGTCCCATAGGTTCACCACCTCACCAAAACTTCCACTACTATATCTCCTCTCCCATTCATCACTCTCGTGAATCTTCCACCTCTCGTTACTCCGCTTCGCTCAAAAACCCTCGCAACATTCCAGCTTCCTCTTGGAAGAAACTGAGTAACAGGAATAGTCTTGATGATCTTGACCTAGATGAAGATGAAGACGATGAAGGTGTTTATGATAATACTCGTAATGTTCGGTTGTATTTTGGGTTCTTCTTGCTTTTCGTGGTGCTTTTTACGCTGTTTTCGTTGATTCTTTGGGGTGCTAGTAAAAGCTACAAGCCTCATATTGTTCTTAAGAGCATAGTGTTTGAGAATCTGAATGTACAATCTGGAAATGATGGAACGGGAGTACCAACGGATATGTTGTCATTGAATTCAACGGTTAAGATCTTATACAGAAATCCTGCAACTTTCTTTGGTGTTCATGTCACGTCAACTCCACTGCACCTTAGCTATTACCAGCTCACACTGGCCTCTGGGCAGATGCATGAGTTCTATCAATCAAGGAAGAGTGAGAGGAAGATAGCTGTTGTGGTATATGCAAACCAAGTTCCACTCTACGGTGGAATCTCAGTTCTTGGAAATACCAACACTGAACACATGCATCGTGTTGCAGTACCAATGAACCTAACATTTGTAGTGAGATCACGAGCTTATGTTTTGGGAAGATTGGTTAAGTCTACAATCTATCGAAGAATCAGATGTTCAATCACTATCCATGGCAACAAACTTGGAAAACATCTTAATTTGACTGATTCATGTGTCTACAAGTAA 966 0.4255 MRGVRMHRKTDSEETTNSNEQSSSTPPRSPSRRPLYYVQSPSNHDVEKMSYGSSPIGSPPHQNFHYYISSPIHHSRESSTSRYSASLKNPRNIPASSWKKLSNRNSLDDLDLDEDEDDEGVYDNTRNVRLYFGFFLLFVVLFTLFSLILWGASKSYKPHIVLKSIVFENLNVQSGNDGTGVPTDMLSLNSTVKILYRNPATFFGVHVTSTPLHLSYYQLTLASGQMHEFYQSRKSERKIAVVVYANQVPLYGGISVLGNTNTEHMHRVAVPMNLTFVVRSRAYVLGRLVKSTIYRRIRCSITIHGNKLGKHLNLTDSCVYK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03123 321 Pfam Late embryogenesis abundant protein 194 300 IPR004864 -
Vivi5g03123 321 MobiDBLite consensus disorder prediction 1 15 - -
Vivi5g03123 321 MobiDBLite consensus disorder prediction 1 55 - -
Vivi5g03123 321 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 131 306 - -
Vivi5g03123 321 MobiDBLite consensus disorder prediction 16 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03123 Vivi-Chr5 120074036 120080932 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03123 - - tpra:123913707 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03123 5 120074036 120080932 Vivi5g03123 5 120074036 120080932 ECH