Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03119 ATGAACCTCGTACTTGCTTTGTTCGGTTTCTGCTCTTTCTTTTTTCTTGTTGCTGCTGAAGATCCTTATAGATTCTTTGACTGGAATGTTACATATGGCGACATTTATCCTCTCGGTGTTAAACAACAGGGTATTCTTATCAATGGTCAATTTCCAGGACCTGAAATTTACGCTGTAACCAATGATAATTTGATCATCAATGTGCACAATAGCTTACCAGAGCCATTTCTTCTCTCATGGAACGGTGTTCAACAAAGAAGAAATTCATTTCAAGATGGAGTTTATGGCACAACATGTCCCATTCCTCCTGGTAAAAACTTCACATACAAACTTCAAGTCAAAGATCAAATTGGAAGCTTCTTCTATTTTCCATCTCTTGCTTTACACAAAGCAGCTGGTGGTTTTGGATCCATCAAAATCCTTAGCAGACCATTGATTCCTGTTCCATTCCCTACTCCAGCTGATGATTTCACCTTCCTCATTGGTGATTGGTACAAACTTGATCACACGATCCTGAGGAGATTTCTTGATTTGGGACACAGACTTCCACTTCCTCAAGCTGTTCTTATCAACGGTCGCGCAAATTGGACAACATTCACAGTTGAACAAGGAAAAACGTATCGGCTTAGAATATCGAATGTTGGATTAGAAAACACACTCAACTTTAGGATTCAAGACCATACTATGAAACTGGTTGAAGTGGAAGGAACACACACTTTGCAAACATCGTATTCATCTATAGATGTGCATGTTGGACAATCTTATTCTGTTCTTGTCACAGCTGATCAAGCACCTAAGGATTTCCACATTGTTGCTTCCACTCGATTCACCGAAAAGATCCTCACAAGCACTGCAGTACTTCACTATAGTAACTCACAAGGATCTCTTTCGGACGCCATTCCTGGTGGACCAACCGATATTGATTGGTCCATCCAACAAGCGCGATCAATCAGGACGAATCTTACTGCGAGTGGACCAAGGCCTAATCCACAAGGTTCATACCACTACGGTACGATAAACATTAGTAGAACAATCGAGCTAGTGAGCTCAGCTGCACTTGTCAACGGTAAGCAAAGATACGCGGTCAACGGTGTTTCTTTTGTACCGGCAGACACTCCTCTGAAGTTAGCTGATTACTTCAAGATTGACGGAGTTTTCAAAGTTGGAAGCATCCCCGATAGCCCTTCCGGTAAATCAACTCATCTTGATACCTCAGTCATGGGTGCTAATTTTCGATCCTTCGTTGAAATCGTGTTTCAGAACCGTGAAAATATCGTCCAAAGTTGGCACATTGATGGATACTCATTTTGGGTCGTAGGAATGGACGGTGGTACATGGACGCCTAATAGTCGTAACCAATACAACCTCCAAGATGCTGTGTCTAGGAGCACAACACAGGTATATCCTAGGTCATGGACTGCAATTTACATGGCACTAGACAATGTGGGAATGTGGAACATTAGGAGTGAATTTTGGGCAAGACAATATCTTGGACAACAATTCTATATGAGGGTATATTCAGATGCTGGATCCCAAAGGGATGAATATCTAATTCCAGAAAATGCTCTTCTTTGTGGCAAAGCAGTGGGTAGAAAAACTACACCATTATGA 1611 0.4165 MNLVLALFGFCSFFFLVAAEDPYRFFDWNVTYGDIYPLGVKQQGILINGQFPGPEIYAVTNDNLIINVHNSLPEPFLLSWNGVQQRRNSFQDGVYGTTCPIPPGKNFTYKLQVKDQIGSFFYFPSLALHKAAGGFGSIKILSRPLIPVPFPTPADDFTFLIGDWYKLDHTILRRFLDLGHRLPLPQAVLINGRANWTTFTVEQGKTYRLRISNVGLENTLNFRIQDHTMKLVEVEGTHTLQTSYSSIDVHVGQSYSVLVTADQAPKDFHIVASTRFTEKILTSTAVLHYSNSQGSLSDAIPGGPTDIDWSIQQARSIRTNLTASGPRPNPQGSYHYGTINISRTIELVSSAALVNGKQRYAVNGVSFVPADTPLKLADYFKIDGVFKVGSIPDSPSGKSTHLDTSVMGANFRSFVEIVFQNRENIVQSWHIDGYSFWVVGMDGGTWTPNSRNQYNLQDAVSRSTTQVYPRSWTAIYMALDNVGMWNIRSEFWARQYLGQQFYMRVYSDAGSQRDEYLIPENALLCGKAVGRKTTPL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03119 536 FunFam Monocopper oxidase-like protein 338 535 - -
Vivi5g03119 536 PANTHER MULTI-COPPER OXIDASE 42 504 IPR045087 -
Vivi5g03119 536 CDD CuRO_1_AAO_like_1 25 140 IPR034273 GO:0005507
Vivi5g03119 536 FunFam Monocopper oxidase-like protein 154 326 - -
Vivi5g03119 536 SUPERFAMILY Cupredoxins 339 527 IPR008972 -
Vivi5g03119 536 FunFam L-ascorbate oxidase homolog 23 144 - -
Vivi5g03119 536 CDD CuRO_3_AAO_like_1 369 490 IPR034275 GO:0005507
Vivi5g03119 536 Gene3D - 154 327 IPR008972 -
Vivi5g03119 536 SUPERFAMILY Cupredoxins 17 170 IPR008972 -
Vivi5g03119 536 Pfam Multicopper oxidase 30 142 IPR011707 GO:0005507
Vivi5g03119 536 SUPERFAMILY Cupredoxins 150 328 IPR008972 -
Vivi5g03119 536 Gene3D - 23 144 IPR008972 -
Vivi5g03119 536 Pfam Multicopper oxidase 156 291 IPR001117 -
Vivi5g03119 536 Pfam Multicopper oxidase 372 508 IPR011706 GO:0005507|GO:0016491
Vivi5g03119 536 Gene3D - 337 532 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03119 Vivi-Chr5 119996572 120000597 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03119 - - gmx:100793934 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03119 5 119996572 120000597 Vivi5g03119 5 119996572 120000597 ECH