Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03070 ATGGCTTCCTTCAACACCATTTGGATTTTCTCTCTCGCTCTTCTCCTCATCGCTTCTCCAGTTGTTAGGTGTCAGTCGGATTCAGGTGAAGCTGTTGAGACTACTGAAAGTGATATTGGAATTGTTGGTGATGATGCTCAAGACTTTGATAGTGTTGGTACCTTTTCTGCTGCTCCGGGGATTGATACGATAAGTGTGTTTCCGAAAAATATTGCGAAATTGGTTACAGCTGGAGAAGAGACCGAGCTGCTAGTTGGTTTAAAAAATGATGGCGAGTCCAGCTTGAATGTTGTTGCAATCAAGGCCAGTATTCACCTTCCTGTTGATCATCGTCTTCTTGTCCAAAATCTTACTGCTCAGGTTTTCAACAATGGTTCTGTACCAGCCTCAGCGCAAGCCACTTTCCCATACATATTTGCAGTCAGCAAATTCTTGCAGCCTGGAAGTTTTGATCTTGTTGGCACTATTATCTATGAGATAGATGAGCATCCATACCAAAGCACCTTCTTTAATGGAACTATTGAAGTTGTTGAATCGGGTGGGTTTCTTAGCATCGAATCTGTTTTTCTTGTTACTCTTGGAGCTGCCCTCCTTGTCCTCCTGGGGCTATGGATTCAGGGTCAAGTACAAAACCTATCTAAGAAATCAAAGAGAGCTCCCAAAGTTGAAGTTGGAACCAGGTCTATAGATGCTTCGACAGACGAATGGCTACAGGGAACTGCATATACTCAGTCTCTTTCCAGCAAATCAAAGAAGAAGAAGTAG 765 0.4301 MASFNTIWIFSLALLLIASPVVRCQSDSGEAVETTESDIGIVGDDAQDFDSVGTFSAAPGIDTISVFPKNIAKLVTAGEETELLVGLKNDGESSLNVVAIKASIHLPVDHRLLVQNLTAQVFNNGSVPASAQATFPYIFAVSKFLQPGSFDLVGTIIYEIDEHPYQSTFFNGTIEVVESGGFLSIESVFLVTLGAALLVLLGLWIQGQVQNLSKKSKRAPKVEVGTRSIDASTDEWLQGTAYTQSLSSKSKKKK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03070 254 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT 9 253 - -
Vivi5g03070 254 Pfam Translocon-associated protein (TRAP), alpha subunit 39 240 IPR005595 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03070 Vivi-Chr5 119189782 119192764 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03070 K13249 - gmx:100777232 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03070 5 119189782 119192764 Vivi5g03070 5 119189782 119192764 ECH