Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03061 ATGGAAGTATCATGGTTGAGTGCAATTTTGGTCGGTGCCGGTTATCTCGCTTTCGGTTACTTCATTGGTTCTCACTATCCCCATCGTTTCTTTTTCTCCAATAGATTTTCATCCCCTAAAGACAAAGATGCTTCGCTTCTCAATAACAACAACAACAGTAAGCAGAAGAAGAATAGTAAGCCCAAAACCAAAGACTCACTTGAGGTTGAACAGCTCGCGGAAATTCTCGAGGATTTTAAGATGATACTCGTTGTAAGAAATGATCTTAAAATGGGTAAAGGAAAAATTGCAGCTCAATGCAGTCATGCAACATTGGGACTCTACAAAAAGGTTCTTTATCGAGCTCCAAAAGCTTTAAATAGGTGGGAGATGTCCGCACAGCCCAAGGTTGTTGTCAAAATTGAAAGTGAGGAAGATATGCTGGCTTTGCAAGAAAGAGCTAAATCTCTGAAGTTACCTACTCATATAACAATTGATGCTGGGCGAACACAGATTGCACCAAATTCCAGAACGGTGATGGCAATTCTCGGACCTGTTGAAGTGGTAGATGAGGTAACAGGTGGACTGAAACTTCTTTAA 579 0.4093 MEVSWLSAILVGAGYLAFGYFIGSHYPHRFFFSNRFSSPKDKDASLLNNNNNSKQKKNSKPKTKDSLEVEQLAEILEDFKMILVVRNDLKMGKGKIAAQCSHATLGLYKKVLYRAPKALNRWEMSAQPKVVVKIESEEDMLALQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDEVTGGLKLL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03061 192 CDD PTH2 79 192 IPR002833 GO:0004045
Vivi5g03061 192 MobiDBLite consensus disorder prediction 43 64 - -
Vivi5g03061 192 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 77 192 - -
Vivi5g03061 192 SUPERFAMILY Peptidyl-tRNA hydrolase II 78 192 IPR023476 -
Vivi5g03061 192 PANTHER PEPTIDYL-TRNA HYDROLASE 2 14 192 IPR002833 GO:0004045
Vivi5g03061 192 NCBIfam aminoacyl-tRNA hydrolase 80 192 IPR002833 GO:0004045
Vivi5g03061 192 Pfam Peptidyl-tRNA hydrolase PTH2 79 192 IPR002833 GO:0004045
Vivi5g03061 192 Gene3D Bit1 77 192 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03061 Vivi-Chr5 118986744 118989785 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03061 K04794 - gmx:102664938 303.908