Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03059 ATGGTTCCACCGGCGACACAACCGCCGAACCCCCAAGAAACCCAACAATTCCTCAGCTCCGTCCTCTCCCAGCGTGGCCCATCCGCCGTCCCCTACTCCGAAGACACCAAATGGCTCATCCGTCAACACTTGATCTCTCTCCTCACAACCTTCCCTTCCCTTGAACCCAAAACCGCTACCTTCACTCACAACGATGGCCGCACCGTTAACCTCCTCCAAGCCGATGGAACCATACCCATGACGTACCAATCTGTTACCTACAACATCCCTGTTGTTATCTGGCTCATGGAATCGTACCCTCGTCACCCTCCTTGTGTCTATGTTAACCCTACCAGAGACATGATCATCAAACGCCCTCACCCTCATGTTAACCCTTCTGGCCTTGTTTCTGTTCCGTATTTGCATAATTGGATCTACCCTAGCTCCAATTTGGTTGATCTTGTTCTCTCTTTGAGTCTTGTATTTGGTCGTGACCCTCCTCTTTATTCCCAACGTAGAACTAGTAACAACAACCCTAATCCCAATCCCAATCCCAATCATAACCCTAATAATAACCCTAATCATAACCCTCATCAAAATCATCATCCTAATCCGAATATCAATCAAAGTTCTAATTTTGCAAATGCTTCTTCATCTGGGTATCCCCATCCTGCTAGGAATAATTACCCTCCTTCGCCTTATTCGCCTTCGCGTCCTACTCATACGGAGGATCCTACTGAGGTTTTTAGGAGGAATGCTATTAACAAGCTTGTGGAGATGGTACATAATGATGTTACATCTCTGAGGAAGACTAGGGAAGCTGAAATGGAGGGTTTGTTTGGTTTGCAAGGGGTTTTGAAGCAGCGGGAGGAGGTTCTGGATAAAGGTGTGAGGGAAATGCGAGAGGAGATGGAGGGTTTGGAGCAGCAACTTCAGATGGTTTTGATGAATACTGATGTTTTAGAGGGTTGGTTGAGGGATAATCAAGGGAAGAAGTTGGAGAGTTTGGAGAATGTGGAGGATGCTTTTGAGTGTGTGGATGTGCTTTCTAAACAGATGCTTGATTGTACTGCTGCTGATTTGGCTATTGAAGATACTCTTTATGCGTTGGATAAGGGTGTTCAGGTGGGAGCTGTGCCGTTTGATCAGTACTTGAGGAGTGTGAGGGTGTTGTCGAGGGAGCAGTTCTTTCACCGGGCTACGGCTGCTAAAGTTAGAGCTGCTCAGTTGCAGGCTCAGGTTGCTACTATTGCTGCGAGGAGTCATCATTATGGTAGCTGA 1260 0.4706 MVPPATQPPNPQETQQFLSSVLSQRGPSAVPYSEDTKWLIRQHLISLLTTFPSLEPKTATFTHNDGRTVNLLQADGTIPMTYQSVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLHNWIYPSSNLVDLVLSLSLVFGRDPPLYSQRRTSNNNPNPNPNPNHNPNNNPNHNPHQNHHPNPNINQSSNFANASSSGYPHPARNNYPPSPYSPSRPTHTEDPTEVFRRNAINKLVEMVHNDVTSLRKTREAEMEGLFGLQGVLKQREEVLDKGVREMREEMEGLEQQLQMVLMNTDVLEGWLRDNQGKKLESLENVEDAFECVDVLSKQMLDCTAADLAIEDTLYALDKGVQVGAVPFDQYLRSVRVLSREQFFHRATAAKVRAAQLQAQVATIAARSHHYGS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03059 419 Gene3D Ubiquitin Conjugating Enzyme 5 162 IPR016135 -
Vivi5g03059 419 Coils Coil 283 310 - -
Vivi5g03059 419 ProSiteProfiles UEV domain profile. 21 165 IPR008883 GO:0015031|GO:0036211
Vivi5g03059 419 SUPERFAMILY UBC-like 24 161 IPR016135 -
Vivi5g03059 419 Gene3D - 341 401 - -
Vivi5g03059 419 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 10 407 - -
Vivi5g03059 419 SUPERFAMILY Endosomal sorting complex assembly domain 340 400 IPR037202 -
Vivi5g03059 419 ProSiteProfiles Steadiness box (SB) domain profile. 340 408 IPR017916 -
Vivi5g03059 419 MobiDBLite consensus disorder prediction 162 237 - -
Vivi5g03059 419 Pfam UEV domain 41 161 IPR008883 GO:0015031|GO:0036211
Vivi5g03059 419 Pfam Vps23 core domain 335 397 IPR017916 -
Vivi5g03059 419 MobiDBLite consensus disorder prediction 184 218 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03059 K12183 - gmx:100798165 581.252