Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03055 ATGGCAGGAACAGCAACAGGGTGTTACAAGTGCGGAAGACCAGGTCACTGGTCACGTGACTGCCCTTTCTCCGCTCCCGATTCAAATCCAAACCCTAACCCTAGTCCTAATCCTAACTCCAACACCGCCGATCTCCCTCCTTCCTCTTCATACAAACCTTCCGGCCCTAGATCCGCCATCGAGAAGCCCAAAAAAATCCCCCGCACCCGCCCCAAACTCACTCCTGAACTTCTTCTCTCCGACGACGGCCTCGGTTACGTCCTTCGCTATTTCCCTCGCTCCTTCAAATACCACGGTCGTGGCCACGAGGTTCGTGATTTGGGTAACCTGATTGAATTGTACTCTGAATGGCACTCTCGTTTGCTCCCTTATTACCCCTTCAATCAATTTGTTCACAAAGTTGAGCAAGTTGCTGCTACAAGGCATGTTAAGATGAGCCTTAGAGAATTGAGAGAAAGAGTTGCAAATGGTGGGGATCCATCAAAATTGCATGAACCACCAGGTGTGCAGAACACCCCAGCCCCAGATGCTCAGCAAGAAAATGGGGAAGTAACTCATCAAGATAATGAGATGTTTGATGAACCTGACAATGTTATTGACATTCAAGAAGACATGCTCAATGATATATATGACAAAGCTACTGAAGAACCTTCTCAGCCCATACAAAATGTGATCGGTGTGACTACAGATCCCAAAAGCAGCGCAATTGAAAGGACAACAAATGAGGCCCCAAGTAATGGAGCCAGTCAGTCCAGCAATGCTGAGATAACAGCAGAGCAGCGAGCCCGTATGGAAGCAAATAGGTTGAAGGCAATTGAAAAGAAATCAAAAGAAGTCCCAAATAATGGAGCCAGTCTGTCCAGCAATGCCGAGATAACAGAAGAGCAGAGAGCCCGAATGGAAGCAAATAGGTTGAAGGCACTAGAAAGGCGCGCGGCTAGAGCCAACCTATCACAGGCTTCCTAG 966 0.4803 MAGTATGCYKCGRPGHWSRDCPFSAPDSNPNPNPSPNPNSNTADLPPSSSYKPSGPRSAIEKPKKIPRTRPKLTPELLLSDDGLGYVLRYFPRSFKYHGRGHEVRDLGNLIELYSEWHSRLLPYYPFNQFVHKVEQVAATRHVKMSLRELRERVANGGDPSKLHEPPGVQNTPAPDAQQENGEVTHQDNEMFDEPDNVIDIQEDMLNDIYDKATEEPSQPIQNVIGVTTDPKSSAIERTTNEAPSNGASQSSNAEITAEQRARMEANRLKAIEKKSKEVPNNGASLSSNAEITEEQRARMEANRLKALERRAARANLSQAS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03055 321 Gene3D - 4 72 - -
Vivi5g03055 321 Coils Coil 290 310 - -
Vivi5g03055 321 ProSiteProfiles Zinc finger CCHC-type profile. 8 22 IPR001878 GO:0003676|GO:0008270
Vivi5g03055 321 MobiDBLite consensus disorder prediction 231 258 - -
Vivi5g03055 321 MobiDBLite consensus disorder prediction 261 277 - -
Vivi5g03055 321 MobiDBLite consensus disorder prediction 231 298 - -
Vivi5g03055 321 MobiDBLite consensus disorder prediction 156 192 - -
Vivi5g03055 321 SMART c2hcfinal6 7 23 IPR001878 GO:0003676|GO:0008270
Vivi5g03055 321 PANTHER TIMELESS INTERACTING-RELATED 3 276 IPR040038 GO:0000076
Vivi5g03055 321 MobiDBLite consensus disorder prediction 27 41 - -
Vivi5g03055 321 SUPERFAMILY Retrovirus zinc finger-like domains 6 24 IPR036875 GO:0003676|GO:0008270
Vivi5g03055 321 Pfam Replication Fork Protection Component Swi3 72 153 IPR012923 GO:0005634|GO:0006974|GO:0031297
Vivi5g03055 321 Pfam Zinc knuckle 7 22 IPR001878 GO:0003676|GO:0008270
Vivi5g03055 321 MobiDBLite consensus disorder prediction 20 73 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03055 K10998 - gmx:100799216 408.297