Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03044 ATGCCTCCGGCGCGTCCGGCGCGTCGACGCGCAACGAACAAGGCTAATGCGAACGGACACTTGCGTTTAGGCGATCTTGTACTCGCTAAGGTCAAGGGTTTCCCTCCTTGGCCTGCCAAGATAAGTAGGCCTGAGGAATGGGAGAAAACACCTGATCCAAAGAAATATTTTGTTCAATTCTTTGGCACCAAAGAGATAGCTTTTGTTGTACCCGCAGATATTCAGGTCTTTACAAGTGAGTGTAAAACTAAGTTGTCTTCTCGGCTTCACGGAAAGACGAAGTACTTTACCCAAGCAGTGAAGGAAATATCTGCAGCTTTTGATGAGATTCAGAAACAGAAGGCCAGTGGTGATGACACAGATGATTCTCGGATTGATTCAGAAGCTCCTCCTGTTGATGAGCCAGTGACTGATCCAAAGGATACCACTGATGCTATGACGTCTCATGCAGAAAAAGATAACATCTATGCGGGTAATGTTGGCTCCAATTTGGAGAACTGTTTGCTGAAAACCAGAGAGAGTGTTAGCCTAGATGAAAAGCTCTCAGAGTCTGGCCGTCCAAATGAAAGTTCTTCTGTTTCATCACCTTTGGTCAAAAGTAAATTATCCACTGGTTCAGAGATAAGGAAGACTTCTAGCAAATCTACTCTTAAAGGTGCAAGTAATGTTAATGATTTTGGTCAACATGATAACGAAAATAGTATTTTAGCAAATGGTAGTAAGCCAAGAAAGCTTATTACTGGTTCAAAGAGGAGACGTGAAGTTGAAGATGACATAAATAAAAATGGTGGATCATCTACTGGAACACTTTTGAAGGTGGAAAAGTCTACTGGCAGTGCTGATCTTTCCAGGTCAGGAGAGACATTTAAATCTGGAAAGAAAGGGAAAGATGCATCTGCTGTTAAATTAAATTCTCCAGACACTTTTAAACCAGACTCAAATGGTAGTAATGGAGAAAAAGGTAAGAACTTGATTTCAAAAAATGCAAGTCTCGAGGTAAAAAATGAATTACAGGAGGCTGATGGCAGAAATTCAAGTATAGGAAAGAATAACCAAGTTCATGCAAAGCATAATATGGGAGCTAATGAATCCTTACATGCTACGAAGAAGTTGAAACGCATGGAGGCCAGAGATGATTTAACTTCAGGGCACATCCCAAAAGATGTGAAAAGTGCTTTGCCTTGCTCTACTTTTGCCATAGACAAATCATCTAAAATGTCAGAGTTGAAAAGGTCCACATTAAATTCCAAAACAGAAAAAAGCTCTGTCCATGAGTTGCTACCTATGATCAAACAACATAGCCATGTTCAGAAAACTATGCTTGATTCTGATAGGGTTGCTTCTGATGATAAAAAAGATTGGGGCAATCTTAAACTGAAAGGTGATACAAAGAATGTTACGACAAAACAAGCACAGAAGAAACGTAAAGCTGTTTGCCTTAATGAAGATGATGATGTACCTAAAACTCCTGTTCATGGAGGAGCTGCAAAAAATATTAAGTCGCCTTTTGCTTCGGAGGTCAAGAAGGGCAATAATGCACATTCTGAAAAATCTGATGCTTCTAAGCTGGCTTACAGAAATTCTAGTGAGCTTGAGGAAGCTCATTTGAAAGAGCCGTCTTCTCAATTACATATTGACGCATCATCAATTAAGCCCCCTGAAAAAGAGAAAGCCGATGAAGCCACTCTTGTGCATGTTCCTCTTAGTCATGATAAGTTAGATTCAAAGCAGTTTCCCTCTAAGGTGGCAAGAGTTAGCTCTGCCTCCCCAGTAAAATCACCTCAGCCAGTTCCTGCAACAACAAAGTTAAATGCTGAACGGAACAAATCTTCCAAATCTTTGCTTAAAGCCTCCAGCATTGCTACTCTAAAGAAGGCTGAGAACGGGTCTTCCAAACCTTCACATAACCTCAGCTCTTCTCAAAACCAAGTTTCTGCTCATAAGAAGAAGCTAGCATCTTCAGCTGAAAATTCCAAAACTGCTCCAAAGACATTGCCTCAGGAAGTTGACGTTCCTGTTTCAACAGTAGATTTTAAGGAGCCTGATGCACTGCTTGTTGATGGATTGGAAGAGGATATGGAAGAAAGAAGTAATATGTATACTGGTTCTGGGACTCCAGAAACATCTAAGACTATGAAGCATCTTATTGCAGCTGCCCAGGCAAAATGGAAAAAAGCTCATTCTCAGTATCTTTCTTCTGATATTCATAATGTCCAGGGGGGAACTCCTAGCCCATCCACAGTTCAGCCATTTCTCCCCGTCTCAAGAAACACCGCACAGACTGATGTGCAGGGAGTTTATGAGCTCACAACTTCGGCTTCTCCACCAACTAATGACTATCACTCTGCATCTCAAAATCAGCTCGATGCGGATGATATTGACGACAGAAGAGTCGGTTCAGTGCAAAGGGGTCCTGAAGGTTCTCTCAGTGGTGGTACAGAGGCTGCTGTTGCTCGTGACGCTTTTGAAGGAATGATAGAAACTTTGTCAAGGACCAAAGAAAGTATTGGGCGTGCAACTCGTCTTGCCATAGATTGTGCTAAGTATGGCATTGCCAACGAGGTTGTTGAGCTTCTCATCCGGAAATTGGAAAATGAAGCTAGTTTTCATCGCAAAGTGGATTTATTTTTTCTTGTTGATTCTATCACTCAGTGCTCACATAGTCAAAAAGGAATTGCTGGAGCTTCTTACATCCCTATAGTTCAAGCAGCGCTGCCACGTCTTCTTGGCGCTGCTGCTCCCTCTGGAGCTAGTGCCCGTGAAAATCGTCGTCAATGTCACAAGGTTTTGAGGTTGTGGCTTGAGAGGAAAATTTTGCCGGAGTCTGTTATACGCCGTCACATGAATGAAATTGGGGTTTCAAATGATGATATCACAGTTAGCTTTTCCTTCAGGCGTCCATCTCGTGCCGAGCGATCTGTAGATGACCCAATTAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGTAATGCCACATTTCAGCTGCCTGGCTTTTCTTGTCATGCATTTGAGGAAGATGAAGATGAAGAAGATTTACAAATCAATTCATGTGCGGATATGTATGGTACATCTCCAGCAGATCCCACACCCAAGTTTGGAGGATCAGATACTCATACTGTGACCCCAAATGACAAACGCCATTGTATCTTGGAGGATGTGGATGGTGAGCTAGAAATGGAAGATGTTTCAGGTCACCCAAAGGACGAGAGACCTGTATATTTGAACAGTTCTGATGAAACTGAAATGCTTCTTCAGAGCTCAAATAGGAATTTAGACCCAACTTCAAATATTTCAGAAGACATATTGGCTACTCCGGAGGGTTCCCCTCCATTACCTCTTGATTCACCCCCTCCAACTCCACCTTTGCCTTCTTCACCTCCCCCTCCTCCTCCTCTATCATCTCCATCTCCTCCCCCACCCCCACCACCTCCAACGTTGCAACCCGTACCTCCTCCTTTACCATCCTCAGCCTCACTAGTATCATTGGTTCCTCAATCATCTGGACTGCCCCGGCCTTCACATGTCTCCCAGTCATTAATGCTACATCAGTCATCATATCAGTCATCACCAAAGTATCCGCAGAACATACCTCACGACTTTAGTAGCTCAACTAGTGGTAACCAAATAGTTCAAATGGCTGGTAATTCTATTTCTGGAGGTCAGAGTCAGACTAATGCAGCTGTCAAGAATGAACTATTTTCACAGCCATCTGCGTTTACCTTGGCTGCAGGATGCAGCTCCCAGGAGCCATCTGGTTTTAACCATTCAAGACAATTAGAATACGGACATAATGATGTGTATTTAAATGCTCAAGTTCATCAACCTAACCAGCAATATCAGCAGGGTAACATCCCATATGCTCAGAGACATGCACATCCTGCCCCACCCCAAAATCCTTCAAATCAGTTCTCATATCCAAATCACCCAGTTCAGCCACACCTTCCACATGCATTTCATCCTCCTTTTCCTTTACCATCTCTTCCAGATGGCCCGAGGCAATTTGTTACTGATGAGCAATGGAGAATGTCATCGACAAACAATCAACATCAAAATGGTGTATGGAGAGGGATAAATCCTTCATGCCCTGGTCCTCCCTTTGGGCAAGAAGGTTTCCGACCATCACTTGAAAGGCCGCCGATAAGTAATGTAGGTTTTCAGCGAGCAATTTCAAGCACCCTACCTAGTGCACCTGTATCAGGACACGGTGCTCCTCAGATGTTGCTTTGCAGGCCAGACATTTCTGCTGTTAATTCTTGGAGACCCACTTGA 4275 0.4316 MPPARPARRRATNKANANGHLRLGDLVLAKVKGFPPWPAKISRPEEWEKTPDPKKYFVQFFGTKEIAFVVPADIQVFTSECKTKLSSRLHGKTKYFTQAVKEISAAFDEIQKQKASGDDTDDSRIDSEAPPVDEPVTDPKDTTDAMTSHAEKDNIYAGNVGSNLENCLLKTRESVSLDEKLSESGRPNESSSVSSPLVKSKLSTGSEIRKTSSKSTLKGASNVNDFGQHDNENSILANGSKPRKLITGSKRRREVEDDINKNGGSSTGTLLKVEKSTGSADLSRSGETFKSGKKGKDASAVKLNSPDTFKPDSNGSNGEKGKNLISKNASLEVKNELQEADGRNSSIGKNNQVHAKHNMGANESLHATKKLKRMEARDDLTSGHIPKDVKSALPCSTFAIDKSSKMSELKRSTLNSKTEKSSVHELLPMIKQHSHVQKTMLDSDRVASDDKKDWGNLKLKGDTKNVTTKQAQKKRKAVCLNEDDDVPKTPVHGGAAKNIKSPFASEVKKGNNAHSEKSDASKLAYRNSSELEEAHLKEPSSQLHIDASSIKPPEKEKADEATLVHVPLSHDKLDSKQFPSKVARVSSASPVKSPQPVPATTKLNAERNKSSKSLLKASSIATLKKAENGSSKPSHNLSSSQNQVSAHKKKLASSAENSKTAPKTLPQEVDVPVSTVDFKEPDALLVDGLEEDMEERSNMYTGSGTPETSKTMKHLIAAAQAKWKKAHSQYLSSDIHNVQGGTPSPSTVQPFLPVSRNTAQTDVQGVYELTTSASPPTNDYHSASQNQLDADDIDDRRVGSVQRGPEGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENEASFHRKVDLFFLVDSITQCSHSQKGIAGASYIPIVQAALPRLLGAAAPSGASARENRRQCHKVLRLWLERKILPESVIRRHMNEIGVSNDDITVSFSFRRPSRAERSVDDPIREMEGMLVDEYGSNATFQLPGFSCHAFEEDEDEEDLQINSCADMYGTSPADPTPKFGGSDTHTVTPNDKRHCILEDVDGELEMEDVSGHPKDERPVYLNSSDETEMLLQSSNRNLDPTSNISEDILATPEGSPPLPLDSPPPTPPLPSSPPPPPPLSSPSPPPPPPPPTLQPVPPPLPSSASLVSLVPQSSGLPRPSHVSQSLMLHQSSYQSSPKYPQNIPHDFSSSTSGNQIVQMAGNSISGGQSQTNAAVKNELFSQPSAFTLAAGCSSQEPSGFNHSRQLEYGHNDVYLNAQVHQPNQQYQQGNIPYAQRHAHPAPPQNPSNQFSYPNHPVQPHLPHAFHPPFPLPSLPDGPRQFVTDEQWRMSSTNNQHQNGVWRGINPSCPGPPFGQEGFRPSLERPPISNVGFQRAISSTLPSAPVSGHGAPQMLLCRPDISAVNSWRPT 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03044 1424 ProSiteProfiles CID domain profile. 814 955 IPR006569 -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 1111 1159 - -
Vivi5g03044 1424 Gene3D - 813 957 IPR008942 -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 549 578 - -
Vivi5g03044 1424 SMART 558neu5 821 952 IPR006569 -
Vivi5g03044 1424 ProSiteProfiles PWWP domain profile. 23 80 IPR000313 -
Vivi5g03044 1424 SMART PWWP_4 21 78 IPR000313 -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 306 333 - -
Vivi5g03044 1424 FunFam Enhancer of ag-4 2 814 957 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 771 787 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 475 490 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 340 358 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 1027 1048 - -
Vivi5g03044 1424 SUPERFAMILY Tudor/PWWP/MBT 18 118 - -
Vivi5g03044 1424 Gene3D - 13 118 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 1090 1104 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 366 385 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 261 286 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 1290 1310 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 510 540 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 1296 1310 - -
Vivi5g03044 1424 Pfam PWWP domain 24 107 IPR000313 -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 112 145 - -
Vivi5g03044 1424 Pfam CID domain 821 945 IPR006569 -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 771 791 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 186 240 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 111 145 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 404 423 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 404 418 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 580 664 - -
Vivi5g03044 1424 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1062 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 1160 1180 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 465 668 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 1090 1180 - -
Vivi5g03044 1424 MobiDBLite consensus disorder prediction 178 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03044 Vivi-Chr5 118814895 118829729 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03044 - - ccaj:109798832 1417.52