Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03022 ATGGAAGAGATTGACCAGAAGCTAGAAGAGAATCATCCAATTGCAATGGACCACAGTGACAACGAAATAGATGATGATGGCACACAGTTTGACGTGGAGGATGACGAAGGAGAAGAAGAAAATGCATCGGAGAATGAAGAGGAAGGGGAAGGAGAAAAAGATACGGTGGATGAAGATCAGTTCAGGTTCTGTGACGGCGTAAATCCTATAGATTTCGTAAATAACAATAATTCCGGTATTCAACTGTACCAGAAATTGAAAGAGTTAGAGTACGAAGCTACGGCTAACAAAAAGCGTAAAGCGATTCAACAATGTCCCCCAGAAGATGGTATTTCTGGAGTAAGCCCGGCTGATATGATGGAATTGATGAATTTTGGAAGAGGAAGGAGATCAAAAAAGAGGTCTAAAAAAAGAGGGAGGCAAAAAGGATCAAAGAAGCAAATTGACGAAAAGATATCACGAATGTTGGGAGATGCCAACATTCACTATGCAAATCGTCGTTATGAGATGGCTGTAGCTGTATTGCATGAAGTTGTCAAGCTAGAACCAAATTTACCTGAGTCGTATCACACTCTTGGACTTGTCTATAGTGCAATGGGGGAGTCCGAAAAAGAAATGGGTTTTTACATGATTGCTGCTCATTTGAATCCAAAAGATTCATTGCACTGGAAAAAACTCTTTGTGTGGTCTATAGAACAAGGTGATATTGGTCAAGCCAATTATTGCATTTCAAAAGCAATAAAAGCAGACCCCGAAGATTGCAGTCTTAGAATTCATCACGCATTGCTTTATGTTGAAAGTCAAGATTATCAAAAAGCTGCCGAGGTTTATGAACAAATATATCAACTTTGGCGTGAAAATATTGATGCACTAAAAGCAGCAGCTAAGTTCTACCAAAAATGTGGTCAAGTTGAACGCTCAATTTGCATTCTAGAAGAGCATCTAAAGAGTAAACCAGATGGAGTAAATGCAAGTGTAGTTGATCTACTTTGTGCCATATTGATGGAAATTAAGGCTCATGACAGAGCTCTTCAATACATAGAACAATCTCAAGTGCTCGGAAAAGAACTGCCCTTAAATTTGAAAGTCAAAGCTGGAATCTGCCATGTTCATCTTGGAAACGTGGAAATGGCTCAGGTTTTCTTTAATGATTTGAAACCAGAGAATGCAAACAAGCATGTTGAATTGATCACCGAAGTCGCGGACTCATTAATGGGTTTTGGACATTATATTTCTGCATTGGATTATTTTAAGATGATTGAAGAAAATAGTAAAAATGAAAATGGTTTTTTGTATTTGAAAATTGCTGGATGTTATCAATCCTTGGGAGAAAGGAAACAAGCAGTTATCTTTTTTTCCAAAGCTCTAGAAACACTACAAGATGATGTTGAAGCGCGCCTAAATTTGGCTTCACTTCTAGTTGAGGATGGGAATGATAATGAAGCCATTTCAGTGCTGTCTCCTCCAAAGGAATTTGACTCTGGTGAAGCACATTCTGAAAAGTCAAATAGATGGTGGGTTGATGTGCGAATAAAAGTTAAGCTCTGTAACATATTTTATACTAGAGGGATGCTTAATGAATTTGTGGATGTAAGTTTCCCTATGGTACGCGAATCACTGGAAGTTGCAACTCCTAGACAAAGGGGAAACTCAAATAGGAGCCTCCCCACAAGGGTTCTCGTTGACAGAGTAAGGGTAGTAGAGTCTCCGGAAACGGGTAGTTTGTTTCGAGCATCCAGGCCCGTAGTTTCATCATATGATCTGTTGAAAGCTTCCAGGGCAAAAAAGTTGCTCCAGAAAAAGGCTATTGAGAAGGAGAGAAAAAAAGCTGAGGCAGTGGCCTCTGGACTTGACTGGTTAAGTGATGATTCAGATGATGAGCCGCAGGTGCCAAACACAGAACCTCCCTTGTGCAATTTTCACAAAGATGACGAATATCACCAGCTAATCATTGATTTGTGCAAGGCATTAGCATCCTTGCAAAAGTATGGGGACGCATTGGAAATTATCAATCGCACTCTAAGATTAGCTCATTCTTTTCTGTCTGTTGAGAAAATTGAGAAACTTCACTCTCTTGGAGTTCAAATGGCATACAAAACCACAGATCCTAAACAAGGTTTTGATTGTGTAAAACGCGTTGTTCTGCAAAATGCACTGAGTTCTGCAGCTTGGAATTGCTACTACAAGGTCATATCAAGATTGGAAACCCGAGACACAAGACACGACAAACTTTTACGTAATATACAAAGAAAATTTGTAGATTTTGTGCCTCCTATCCTCATTTCCGGGCATCAGTTTACTATATGTAGCCATCATCAAGATGCGGCAAGGAAGTACCTTGAAGCTTATAAACTTTTGCCTGAGAATCCATTAGTTAACCTTTGTGTTGGAACGGCATTGATCAACTTGGCGCTGGGTTTCAGACTTCAAAATAAGCATCAGTGTCTTGTACAAGGTTTTGCATTCCTCTACAATAATGCGAGGATCTGTGAGAACAGTCAGGAATCTTTATTCAACATAGCTCGAGCATTCCATCATGTTGGTTTTGTAACACTGGCAGCGATGTACTATGAGAAGGTGATTGCTATTAACGAAAAAGACTATCCAATTCCAAAACTCCAAAATGAGAATATTGATGTCATTGAAAATGAGAAACCTGGTTACTGCAACCTTCGCAGAGAGGCAGCTTACAATCTGCATTTAATCTACAAAAAGAGTGGGGCGGTTGATCTTGCTAGGCAAGTTCTGAAAGATTATTGTTCCATTTGA 2769 0.3951 MEEIDQKLEENHPIAMDHSDNEIDDDGTQFDVEDDEGEEENASENEEEGEGEKDTVDEDQFRFCDGVNPIDFVNNNNSGIQLYQKLKELEYEATANKKRKAIQQCPPEDGISGVSPADMMELMNFGRGRRSKKRSKKRGRQKGSKKQIDEKISRMLGDANIHYANRRYEMAVAVLHEVVKLEPNLPESYHTLGLVYSAMGESEKEMGFYMIAAHLNPKDSLHWKKLFVWSIEQGDIGQANYCISKAIKADPEDCSLRIHHALLYVESQDYQKAAEVYEQIYQLWRENIDALKAAAKFYQKCGQVERSICILEEHLKSKPDGVNASVVDLLCAILMEIKAHDRALQYIEQSQVLGKELPLNLKVKAGICHVHLGNVEMAQVFFNDLKPENANKHVELITEVADSLMGFGHYISALDYFKMIEENSKNENGFLYLKIAGCYQSLGERKQAVIFFSKALETLQDDVEARLNLASLLVEDGNDNEAISVLSPPKEFDSGEAHSEKSNRWWVDVRIKVKLCNIFYTRGMLNEFVDVSFPMVRESLEVATPRQRGNSNRSLPTRVLVDRVRVVESPETGSLFRASRPVVSSYDLLKASRAKKLLQKKAIEKERKKAEAVASGLDWLSDDSDDEPQVPNTEPPLCNFHKDDEYHQLIIDLCKALASLQKYGDALEIINRTLRLAHSFLSVEKIEKLHSLGVQMAYKTTDPKQGFDCVKRVVLQNALSSAAWNCYYKVISRLETRDTRHDKLLRNIQRKFVDFVPPILISGHQFTICSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGFRLQNKHQCLVQGFAFLYNNARICENSQESLFNIARAFHHVGFVTLAAMYYEKVIAINEKDYPIPKLQNENIDVIENEKPGYCNLRREAAYNLHLIYKKSGAVDLARQVLKDYCSI 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03022 922 SUPERFAMILY TPR-like 643 916 IPR011990 GO:0005515
Vivi5g03022 922 MobiDBLite consensus disorder prediction 125 148 - -
Vivi5g03022 922 SMART tpr_5 429 462 IPR019734 GO:0005515
Vivi5g03022 922 SMART tpr_5 152 185 IPR019734 GO:0005515
Vivi5g03022 922 SMART tpr_5 186 219 IPR019734 GO:0005515
Vivi5g03022 922 SMART tpr_5 834 867 IPR019734 GO:0005515
Vivi5g03022 922 SMART tpr_5 254 287 IPR019734 GO:0005515
Vivi5g03022 922 SMART tpr_5 647 680 IPR019734 GO:0005515
Vivi5g03022 922 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 3 921 IPR039340 GO:0006383
Vivi5g03022 922 Gene3D Tetratricopeptide repeat domain 365 504 IPR011990 GO:0005515
Vivi5g03022 922 MobiDBLite consensus disorder prediction 1 58 - -
Vivi5g03022 922 SUPERFAMILY TPR-like 160 486 IPR011990 GO:0005515
Vivi5g03022 922 Gene3D Tetratricopeptide repeat domain 580 922 IPR011990 GO:0005515
Vivi5g03022 922 MobiDBLite consensus disorder prediction 26 54 - -
Vivi5g03022 922 Gene3D Tetratricopeptide repeat domain 145 358 IPR011990 GO:0005515
Vivi5g03022 922 ProSiteProfiles TPR repeat profile. 186 219 IPR019734 GO:0005515
Vivi5g03022 922 FunFam General transcription factor 3C polypeptide 3 562 921 - -
Vivi5g03022 922 MobiDBLite consensus disorder prediction 1 25 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03022 K15201 - gmx:100813793 1183.7