Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03016 ATGGCAAAATCTGGAAATTTTGTATCTCAAAGAAGCTTTAGTCCAATATTCAATCCATGCCATACTGCTTCCAAGGCAAAAACCTTCAGATTTCTCTCTCATTTTCACACTTACAATAATTCTAATGTTAGTAGTTACACTATCACAGCTTCTACCAAAAGAAAAGGAAACTTGCAATCTCCATTGATTAGGAAGAACCCCCGCCGTCTGATTACAATATCGCCGTCTGATGGAAAATATCACGGGGAATGGACGTGTGATTATCATGTATCTTTGCGCGACCTACATTTACAGGATTTGATTAAAGGTGAAGATGATCCAAGTAAGAATGCACAAGTATTCATCAACCTCTCCATCCAAAAGCATGCTAGCTTTGGCTTATCAGTAGATGCAAGAATCTCCACATCCTTGCCTTCAAAATGCAGCAACTGTTCTTCCCCATATTGCAGACAGCTTGACGCAAACTTTAACGCATGGGTTCTCAGGGCTGCAAGTAGAGATAAATGTAAGACGCCGCTACCTGAAATTGGAGGCGACCCTTACGTGATATATACTAGACCCGGATGCGAAGTTGATCTTGATTCTCTTGTACAAGATGCCATCAGGCTAACCTCAGCAGTACAAGACACTTGCTCGAAGTTGTGCGCCTCGGAGTTGCGTGCCTCTGAGGGTACTATACTATATGAAACTCGGCAAAGTGAGGCATCGTTTGATAAAAGATGGTCGAGACTATTGGAACTAAAGAAAACGATTTTATGA 759 0.4163 MAKSGNFVSQRSFSPIFNPCHTASKAKTFRFLSHFHTYNNSNVSSYTITASTKRKGNLQSPLIRKNPRRLITISPSDGKYHGEWTCDYHVSLRDLHLQDLIKGEDDPSKNAQVFINLSIQKHASFGLSVDARISTSLPSKCSNCSSPYCRQLDANFNAWVLRAASRDKCKTPLPEIGGDPYVIYTRPGCEVDLDSLVQDAIRLTSAVQDTCSKLCASELRASEGTILYETRQSEASFDKRWSRLLELKKTIL 252
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03016 252 PANTHER LARGE RIBOSOMAL RNA SUBUNIT ACCUMULATION PROTEIN YCED HOMOLOG 2, CHLOROPLASTIC 1 251 IPR044985 -
Vivi5g03016 252 Pfam Large ribosomal RNA subunit accumulation protein YceD 129 248 IPR003772 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi5g03016 Vivi-Chr5 118337819 118339852 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03016 - - psat:127101238 353.214