Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03015 ATGAATAAAATCCGATCTCGGGCATGGGAAATTCTAGGCGATTCAACGGCTCGTTTGTCTCAAAGTTCAAGGCAGGAGGATTTATCCGCTTCCGAGGTTGCTGAAGATGCTGGCGAAACATTGGAACTGTTTTATCAATGTCGATGCGGTGACTACTTCTCTGTGGATTTGTCGAAGTTGCAGAAAATGGGATATTCCTTGTTGAGAGATGGAAGCAACGTATCTGTACGCAATGCTGATGCTTTACCCGGATCAGTGATTCTTCCTTGTGAATCGTGTTCGTTGAAAGCTCGGCTTGTACTCAGTATCGATGATAGTTGGAATTATTAA 330 0.4364 MNKIRSRAWEILGDSTARLSQSSRQEDLSASEVAEDAGETLELFYQCRCGDYFSVDLSKLQKMGYSLLRDGSNVSVRNADALPGSVILPCESCSLKARLVLSIDDSWNY 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03015 109 Gene3D DPH Zinc finger 15 108 IPR036671 -
Vivi5g03015 109 SUPERFAMILY CSL zinc finger 38 106 IPR036671 -
Vivi5g03015 109 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 19 102 IPR007872 -
Vivi5g03015 109 Pfam CSL zinc finger 30 100 IPR007872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03015 Vivi-Chr5 118337802 118338244 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03015 K17867 - gmx:100814856 121.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03015 5 118337802 118338244 Vivi5g03015 5 118337802 118338244 ECH