Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03013 ATGGGCTTTCGTTTACCTAGTATCATCAGAAAATCATCATCATCTTCAAAAGCAGTGGACATGCGAAAGGGATGTTTTACAGTATATGTTGGAGAGGAAATGAAGCGGTTTCTGATCCCAATATCATACTTGAACCATAACTCATTCCAAGAATTGCTGAGCCAAGCTGAGGAACAATTCGGATATAACCATCCAATGGGTGGTCTCACAATTCCTTGCGGAGAAGATTTGTTCTTGGATATCACTTCTCGCTTGAGTTGGAGAGCACCACCATTAGATGGATTGGTGATGGAAGGACCAACTGCAGAGCTTGTACTAGCAGGAAATGCTTGCACTGAACGTTGTGCTGATCGTGGAGGACGGGTGGGACAATCAGAGATAATATGGCCCCGCTGCTTGCAATAA 405 0.442 MGFRLPSIIRKSSSSSKAVDMRKGCFTVYVGEEMKRFLIPISYLNHNSFQELLSQAEEQFGYNHPMGGLTIPCGEDLFLDITSRLSWRAPPLDGLVMEGPTAELVLAGNACTERCADRGGRVGQSEIIWPRCLQ 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03013 134 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 85 IPR003676 GO:0009733
Vivi5g03013 134 Pfam Auxin responsive protein 13 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03013 Vivi-Chr5 118330567 118335187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03013 20 78 Calmodulin-binding Proteins AT5G20810 52.542 1.27e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03013 - K14488 vvo:131605251 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03013 5 118330567 118335187 Vivi5g03013 5 118330567 118335187 ECH