Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02988 ATGATTCTTCAACAAGCTTCTCCCACTTTTCACTTCTCTCTATGTCCCTGCAACAACAACAATGGCTTCCCTTCTAATTTCCCCCTTTCCAAAACCATGAAGAAACGCTTCATTTCTAATTATTACTCATATCACAAATTCCGAAGAAAAAAATGGATTCTTTACTCCTCTTCAATTCACAAACAAGGTTCCACTACAAGGGCTGCTAAAAGTTTCGTACTTGATAATAGGATTGATAATAGGATTTCAAATGATGAACTTGAAGAAGGTAAATTGCAGGATTCACAAGTTCAATTGGGTACAAATTTCACTACTTTTCAGGAAGATCCGATTGTGGATAAGCTTAGAACTCAACTGGGTGTGATTCACCCGATTCCGTCGCCGCCTATTAACGGAAACATTGCTGGTTTGTTTGTGTTTTTTTTCTTTGTTGGTGTTGTTTTTGATAAACTGTGGAATTTTAGGAAGAGGAGAAACAAAGTTAGTAGTAATGAGGATAGTTTTCGCGGTGTGTGGCCTCAAGTGCCAACTAGTTTTTCTTTGTTTTTGGAGAAGGATTTGCAGAGAAAAGAGTCGGTTGAATGGGTGAATATGGTGTTGGGGAAGTTGTGGAAGGTTTATAGAGGTGGACTTGAGAATTGGGTTATTGGGTTGCTTCAACCTGTTATTGATGATTTGGAGAAGCCTGATTATGTTGAAAGAGTTGAGATTAAGCAGTTTTCATTAGGGGATGAACCTTTGTCTGTTAGGAATGTTGAACGCAGGACTTCTCGCCGCGTCAATGATTTACAGTACCAGATAGGCCTTAGGTATACTGGAGGTGCCCGCATGCTGTTAAGTCTTTCTCTTAAATTTGGCATTATTCCAATTGTTGTACCAGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTTTGGGTAAAATTGCGACTAATACCAACAGAACCTTGGGTCGGTGCAGCTTCATGGGCTTTTGTTTCACTTCCAAAGATCAAATTTGAGCTGTCTCCATTCCGTTTGTTCAATTTAATGGCAATTCCAGTTCTGTCAATGTTTTTGACCAAACTTCTTACAGTAGATTTACCTAGACTATTTGTACGGCCAAACAAAATTGTTTTGGATTTCCAAAAGGGAAAAGCTGTTGGTCCTGTCACTGTTGGTCCCGTCGCTGATGGTGTTAAAGATGGAGAAATACAAGAAGGAAACATGGATTCTGTTGGTGAACTATCCGTCACTCTTGTGGATGCTAGAAAACTTCCTTATCTTTTTGGCAAGACAGACCCGTATGTTATTCTTAGCCTTGGAGATCAAACCATTCGCAGCAAAAAGAACAGTCAAACTACTGTCATTGGTCCCCCTGGAATGCCAATTTGGAATCAGGATTTCCATATGCTTGTTTCCAACCCTAAAAAGCAGAAGTTAAATATCCAAGTAAAGGACGCACTGGGATTTGCAGATTTGAGTATCGGTACAGGAGAGGTTGATTTGGGATCTCTTCAAGACACAGTACCAACAGACAGAATTGTGGTTTTACAAGGGGGTTGGAGTTTTAGAGGAAAGGGCTCAGCCGGGGAGATATTGCTTAGGCTAACATATAAAGCCTATGTAGAGGATGAGGAAGATGACAAGACCGAGGAGGATTCCATTGATATTGATGCTTCAGATGACGAGTTGTCTGATACAGAAGAAGCAAATGTCACTGATCAAAAGGGCATAAGAGATTCTATGTATCAAACAGATAAAGAATCATTTATGGATGTTTTGGCTGCAATAATTGTCAGCGAAGAGTTTCAAGGGATAGTAACATCTGAAGCTGGGTTTACCAAAGGTTTGGATAATGGCTCAAATACAGCGTCTAAAGTACCAAAATCTTCTGTTGCCAATGCGGAATCAACTCCTAGTTCTGATAATTCTGAAGGTTCTGGAGGATCAGCCTTATTTTGGCTTGCTGTGATTACTGGCATGGCACTACTAATTGCTGTCAATATCAGTGGTTCAAGTATCTTCAATCCTTAA 2016 0.3993 MILQQASPTFHFSLCPCNNNNGFPSNFPLSKTMKKRFISNYYSYHKFRRKKWILYSSSIHKQGSTTRAAKSFVLDNRIDNRISNDELEEGKLQDSQVQLGTNFTTFQEDPIVDKLRTQLGVIHPIPSPPINGNIAGLFVFFFFVGVVFDKLWNFRKRRNKVSSNEDSFRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGLENWVIGLLQPVIDDLEKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLSLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTVDLPRLFVRPNKIVLDFQKGKAVGPVTVGPVADGVKDGEIQEGNMDSVGELSVTLVDARKLPYLFGKTDPYVILSLGDQTIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPKKQKLNIQVKDALGFADLSIGTGEVDLGSLQDTVPTDRIVVLQGGWSFRGKGSAGEILLRLTYKAYVEDEEDDKTEEDSIDIDASDDELSDTEEANVTDQKGIRDSMYQTDKESFMDVLAAIIVSEEFQGIVTSEAGFTKGLDNGSNTASKVPKSSVANAESTPSSDNSEGSGGSALFWLAVITGMALLIAVNISGSSIFNP 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02988 671 SMART C2_3c 408 508 IPR000008 -
Vivi5g02988 671 Gene3D C2 domain 397 535 IPR035892 -
Vivi5g02988 671 ProSiteProfiles C2 domain profile. 394 509 IPR000008 -
Vivi5g02988 671 CDD SMP_SF 211 374 - -
Vivi5g02988 671 MobiDBLite consensus disorder prediction 539 562 - -
Vivi5g02988 671 MobiDBLite consensus disorder prediction 539 573 - -
Vivi5g02988 671 Pfam C2 domain 407 502 IPR000008 -
Vivi5g02988 671 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 407 534 IPR035892 -
Vivi5g02988 671 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 189 376 IPR031468 GO:0008289
Vivi5g02988 671 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 61 671 - -
Vivi5g02988 671 MobiDBLite consensus disorder prediction 611 641 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02988 407 543 Acyl Lipid Metabolism Gene Families AT4G13550 30.714 1.96e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02988 - - adu:107477171 942.184