Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02958 ATGGCGATGGCTTTCAAAATGGCTACCACTGGGATGTGGGTAACTGAAGAGTGCAAGAGCTCTTTCATGGAGATGAAGTGGAAAAAGGTACATAGGTACATAGTTTTCAAGATCGATGAAAGGTCGAGGCTTGTAACCGTTGATAAGGTTGGTGGTCCTGGAGAAAACTACGATGATCTTGCTGCTTCTTTGCCTAATGATGATTGTAGATATGCTGTCTTTGATTTCGATTTTGTTACGGTTGATAACTGCCGCAAAAGCAAGATCTTCTTCATTGCATGGTCACCAACAGCGTCTAGGATAAGAGCAAAGATGCTATACGCAACTTCAAAAGATGGGTTGAGAAGAGCTTTAGATGGAATCTCATATGAAGTTCAAGCAACTGATCCAACTGAGATGGGGTTTGATATAATTCAAGACAGAGCCAAATAG 432 0.4144 MAMAFKMATTGMWVTEECKSSFMEMKWKKVHRYIVFKIDERSRLVTVDKVGGPGENYDDLAASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKMLYATSKDGLRRALDGISYEVQATDPTEMGFDIIQDRAK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02958 143 PANTHER COFILIN-RELATED 8 142 IPR017904 GO:0015629|GO:0030042
Vivi5g02958 143 SUPERFAMILY Actin depolymerizing proteins 6 141 - -
Vivi5g02958 143 SMART adf_2 16 143 IPR002108 GO:0003779
Vivi5g02958 143 CDD ADF_cofilin_like 10 142 IPR017904 GO:0015629|GO:0030042
Vivi5g02958 143 FunFam Actin-depolymerizing factor 2 5 143 - -
Vivi5g02958 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
Vivi5g02958 143 Gene3D Severin 8 143 IPR029006 -
Vivi5g02958 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 140 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02958 Vivi-Chr5 117749855 117751210 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02958 K05765 - gmx:100801857 284.263