Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02953 ATGTCTCAAAAAACATCTTTCTACCCTCAAGTTGAATCCACCAATCCAGACGCAAATTCTCCTTTCTCCCATTCATCTTCCTCTTCATCCATGTATCCATCAATCGCCACTGAATATCCAAAAACTGCACAACAACAACCATCAGAACATGTTCTGGTCACCGTCCCCGACGTGATTCTCCATCTCATAGAAAAAGATTCCAGCGTCCACCTAGCATCCGGGGAGTTAACCATAGTAAGCCTTAAAGAAGGAAGCAACGTGGCAGCAGTTATTGCTCGTATCGGTGATCAAATCCAATGGCCATTAGCCAAAGACGTTTCGACAGTGAAACTCGACGAGTCTCATTACTTTTTCACACTCAAAGTTCCACGGAGTAATAATAATACAGAAGAGAATATTGAGTCTGAAGTTTTGAACTACGGATTGACGGTTACAGCAACAGGGCGAGAGAAAGTTTTGGTTTTGAAAGAACTTGATAAGGTTCTTGAAAAGTATAGTTTTCTTTCTGTGGAGAAGGTGAAGGGTGTGAAAGGGTGGGAGGTTTTGGAGAAAAAGGAGGTTTTGGAGGAAAGTTCTGCGGCTGCTTATTGGACTACGTTGGCACCAAACGTGGAGGATTATAGTGGAAGATTTGCGAGATGGATTGCGGCAGGGTCAGGACAAATGATCAGGGGGATTCTGTTTTGTGGAGATGTTACCGTGGAGAGGTTGAAATGGGGGAATGATTTCATGAAGAAGAGGTTGCAGCCTGGTTCTTCTCAATCAAAAATTAGTCCACATGCCATGGCGAGCATGAAAGGGGTTAAGAAGTTGACAAAGATGTCTGAGAATGTTGCTCTTGGTGTTCTCTCTGGTGTTGTTAAGGTGTCTGGATTTTTTACTAGTTCGGTGGTGAACTCTAAGCCAGGGAAGAAGTTATTTAGTCTTCTTCCTGGAGAAATTGTACTTGCTACCCTAGATGGATTCAATAAGGTGTGTGATGCTGCAGAAGTAGCTGGAAGGAATGTTATGTCAACTTCATCAGTTGTGACTACTGGACTAGTTACACATAAATATGGAGAACAAGCTGGTGAGGTTACAAATGAAGGGCTTGGTGCTGCAGGGCATGCAATTGGTACAGCTTGGGCTGTCTTCAAACTAAGGAAGGCACTCAACCCCAAGAGTGTCATCAAACCAACAACAATAGCTAAAGCTGCTGCCCAAGCAAGTTCTACTCAACTAAAGGCTAAAAAATAA 1236 0.432 MSQKTSFYPQVESTNPDANSPFSHSSSSSSMYPSIATEYPKTAQQQPSEHVLVTVPDVILHLIEKDSSVHLASGELTIVSLKEGSNVAAVIARIGDQIQWPLAKDVSTVKLDESHYFFTLKVPRSNNNTEENIESEVLNYGLTVTATGREKVLVLKELDKVLEKYSFLSVEKVKGVKGWEVLEKKEVLEESSAAAYWTTLAPNVEDYSGRFARWIAAGSGQMIRGILFCGDVTVERLKWGNDFMKKRLQPGSSQSKISPHAMASMKGVKKLTKMSENVALGVLSGVVKVSGFFTSSVVNSKPGKKLFSLLPGEIVLATLDGFNKVCDAAEVAGRNVMSTSSVVTTGLVTHKYGEQAGEVTNEGLGAAGHAIGTAWAVFKLRKALNPKSVIKPTTIAKAAAQASSTQLKAKK 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02953 411 MobiDBLite consensus disorder prediction 1 29 - -
Vivi5g02953 411 Pfam Senescence domain 213 400 IPR009686 -
Vivi5g02953 411 PANTHER SPARTIN 27 408 IPR045036 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02953 Vivi-Chr5 117661652 117663473 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02953 K19366 - gmx:100802385 520.005