Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02945 ATGTCTTCACCTCTCAAACTTCTTTGTATTTCCTTCCTTTCCATCATCACTATTGTTTCTGCTGGCTTCATTGCAGGCCCGAAAACTGTCACTTACGACGGCCGCTCACTCATTATCAATGGAAAACGAGAGCTTTTCTTCTCCGGTTCCATTCATTATCCACGAAGCGTCCCAGAGGAGTGGCCACAAATCCTTGATAGGGCAAAACATGGAGGGATAAACTTAATCCAAACATACGTCTTTTGGAATGGTCATGAGTTTGAGAAAGGCGATGTGAACTATGAAGGCAGGTATGATTTGGTAAAATTCCTTAAGCTCGTACAAGAGAAAGGAATGTATGCTACCCTTAGAGTTGGCCCTTTTATTCAAGCCGAATGGAATCACGGAGGACTTCCGTATTGGCTAAGAGAGGTCCCCGACATCATATTCCGTTCGAACAATGAACCGTTTAAGAAACACATGAAAGAATATGTATCAAACGTTATAGAAAAAATGAAACAAGAAAAACTCTTTGCTCCTCAAGGAGGCCCTATCATCTTGGCACAGATTGAGAATGAGTACAACCATATTCAACTTGCTTATGAAGCGGATGGAGATAGTTATGTTCAATGGGCTGCAAAAATGGCAGTTTCACTATATAACGGAGTTCCATGGATCATGTGCAAGCAAAAGGATGCTCCTGATCCAGTTATTAATGCTTGCAACGGAAGGCACTGTGGTGATACCTTCACCGGTCCAAACAAACCATACAAACCATCCATTTGGACTGAAAACTGGACTGCTCAGTATAGAGTATTTGGAGATCCACCGTCCCAAAGATCCGCGGAAGACATCGCCTTCTCAGTTGCTCGCTTCTTCTCTAAGAATGGATCTTTAGTCAACTACTATATGTATCATGGTGGAACCAATTTTGGCAGAACAACCTCTGCCTTTACCACAACATGTTACTACGACGAAGCTCCTCTTGATTCATATGGTCTGCAAAGAGAACCAAAGTGGAGTCATCTAAGAGATGTTCACAAGGCTGTGAACCTATGTAAGAAGGCTCTACTCAACGGTGAACATACCGTACAAAAAATTAGCCAGTATCATGAGATTATAGTCTACGAAAAGAAAGGGAGTAATTTATGTGCTGCTTTCATCACTAACAACCACACCAAAAATCCGAAAGTAATAGAATTCAGAGGTTCGAGCTACTATATGCCTCCGCGTTCCATCAGCATTCTTCCTGATTGTAGAACTGTGGTCTTCAACACTCAAAATATTGCTTCGCAACACAACTCAAGAAACTTCGAGAAATCAAAGGCTGCAAACAATCACAAGTGGGAGGTGTATTCTGAGCCTATTCCAACTTCCAAGGAATTGCCACCAAAACAAAAAATCCCTGCTGAGCTTTACAGCTTGCTTAAGGACACCACTGATTATGGATGGTACACTACTAGTGTGGAGTTCGGTCCAGAAGACTTACCAAAGAAGAATGAGATATCACCGGTTCTTCGTATTCTGAGTCTCGGCCACTCATTGCTTGCTTTTGTAAATGGACAATACGTTGGATCTAATCATGGTAGCCATGAAGAGAAAGGCTTTGAATTCCAGAAACCTGTAAGCTTCAAAGTTGGAGTTAACCAGATAGCTATCTTGGCTTCTTTAGTAGGACTACCTGATAGTGGAGCATACATGGAACACAGGTATGCAGGGCCTAAGACTATAACCATCCTTGGTTTGAACTCTGGAACAATTACTCTCACTGCTAATGGCTGGGGTCACCAGGTTGGTCTCCAAGGAGAGAAACTTCAAATTTTCACTGAGGAGGGATCAAAGAAAGTACAGTGGAAAGATGCCAAGGGAAATACTTCACCTCTCTCTTGGTACAAGACAAATTTTGCAACTCCAGAGGGAAAGTGCCCAGTTGCTATCAGTATGACTGGTATGGGAAAAGGAATGATTTGGGTCAATGGCGAAAGCATCGGCCGTCACTGGATGAGTTACCTCTCTCCACTTGGAAAGCCTACTCAATCAGAGTACCACATTCCAAGATCATTCCTTAAACCAAAAGATAACTTGCTTGTAATATTGGAGGAAGAGATAGCACATCCAGAAAAAGTTGAGATAGTAAGGGTCAACAGAGATACAATATGCAGTTACATCACAGAGAATCACCCTCCAAATATCAAGTCATGGTCAAGTAAGAACCAAAAACTCACACCGGTTTCGGGGAACCTCACTCCAGCAGCAGTACTCAAGTGTCCAAACAAAAAAGCCATTAAGGCTGTTGAGTTCGCAAGCTTTGGCGATCCTTTAGGTTTCTGTGGAGAGTTTATCATGGGAAACTGTAACGCACCTTCCTCCAAGAAGATTGTTGAGCAGTATTGCTTAGGAAAAGGATCTTGCGCGATTCCGATGGACAAAGCACTCTTCACCGGTGGTAAAGATGAATGCCCGAATGCGATAAAGACACTAGCAGTCCAAGTGAAGTGTGGTCCCTCAAAGGATGAGAAGGATATGATCAATGAGAAGGATGATGATGACGACGACGATGAGGATGAGGATGAGGAGGAGGCTGAGAAGGAGAAGAAGAAGGGTAAGAAAGAATCGAGTTAG 2601 0.4287 MSSPLKLLCISFLSIITIVSAGFIAGPKTVTYDGRSLIINGKRELFFSGSIHYPRSVPEEWPQILDRAKHGGINLIQTYVFWNGHEFEKGDVNYEGRYDLVKFLKLVQEKGMYATLRVGPFIQAEWNHGGLPYWLREVPDIIFRSNNEPFKKHMKEYVSNVIEKMKQEKLFAPQGGPIILAQIENEYNHIQLAYEADGDSYVQWAAKMAVSLYNGVPWIMCKQKDAPDPVINACNGRHCGDTFTGPNKPYKPSIWTENWTAQYRVFGDPPSQRSAEDIAFSVARFFSKNGSLVNYYMYHGGTNFGRTTSAFTTTCYYDEAPLDSYGLQREPKWSHLRDVHKAVNLCKKALLNGEHTVQKISQYHEIIVYEKKGSNLCAAFITNNHTKNPKVIEFRGSSYYMPPRSISILPDCRTVVFNTQNIASQHNSRNFEKSKAANNHKWEVYSEPIPTSKELPPKQKIPAELYSLLKDTTDYGWYTTSVEFGPEDLPKKNEISPVLRILSLGHSLLAFVNGQYVGSNHGSHEEKGFEFQKPVSFKVGVNQIAILASLVGLPDSGAYMEHRYAGPKTITILGLNSGTITLTANGWGHQVGLQGEKLQIFTEEGSKKVQWKDAKGNTSPLSWYKTNFATPEGKCPVAISMTGMGKGMIWVNGESIGRHWMSYLSPLGKPTQSEYHIPRSFLKPKDNLLVILEEEIAHPEKVEIVRVNRDTICSYITENHPPNIKSWSSKNQKLTPVSGNLTPAAVLKCPNKKAIKAVEFASFGDPLGFCGEFIMGNCNAPSSKKIVEQYCLGKGSCAIPMDKALFTGGKDECPNAIKTLAVQVKCGPSKDEKDMINEKDDDDDDDEDEDEEEAEKEKKKGKKESS 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02945 866 Gene3D - 740 833 IPR043159 -
Vivi5g02945 866 MobiDBLite consensus disorder prediction 837 853 - -
Vivi5g02945 866 Pfam Beta-sandwich domain in beta galactosidase 350 422 IPR041392 -
Vivi5g02945 866 Pfam Glycosyl hydrolases family 35 36 342 IPR031330 -
Vivi5g02945 866 ProSiteProfiles SUEL-type lectin domain profile. 743 827 IPR000922 GO:0030246
Vivi5g02945 866 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Vivi5g02945 866 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Vivi5g02945 866 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Vivi5g02945 866 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Vivi5g02945 866 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Vivi5g02945 866 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Vivi5g02945 866 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Vivi5g02945 866 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Vivi5g02945 866 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Vivi5g02945 866 MobiDBLite consensus disorder prediction 827 866 - -
Vivi5g02945 866 SUPERFAMILY Galactose-binding domain-like 406 567 IPR008979 -
Vivi5g02945 866 SUPERFAMILY (Trans)glycosidases 27 346 IPR017853 -
Vivi5g02945 866 PANTHER BETA-GALACTOSIDASE RELATED 20 730 IPR001944 GO:0004553|GO:0005975
Vivi5g02945 866 CDD Gal_Rha_Lectin_BGal 735 826 - -
Vivi5g02945 866 FunFam Beta-galactosidase 589 713 - -
Vivi5g02945 866 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Vivi5g02945 866 FunFam Beta-galactosidase 27 346 - -
Vivi5g02945 866 Gene3D - 589 716 - -
Vivi5g02945 866 SUPERFAMILY Galactose-binding domain-like 584 732 IPR008979 -
Vivi5g02945 866 Pfam Galactose binding lectin domain 747 826 IPR000922 GO:0030246
Vivi5g02945 866 Gene3D Glycosidases 27 346 - -
Vivi5g02945 866 Gene3D - 407 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02945 Vivi-Chr5 117471094 117475878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02945 30 830 Glycoside Hydrolase AT2G16730 61.491 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02945 - - tpra:123913071 1363.59