Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02937 ATGGGTGTTCTTGATCACATCTCCGACCTCTTCGACTGCTCTTACCGAAGAAGCTCCAAATACAAGAAAAAACGCAAGCAGTTCCAAACGGTGGAAGTGAAAGTGAAGATGGATTGTGAAGGATGCGAGAGAAAAGTGAAGAAATCGGTGGAAGGGATGAAAGGCGTGACACAAGTGGAAGTTGAACGGAAAGCAAACAAAGTAACCGTTAGGGGGTACGTGGAGCCTTCAAAGGTGGTGAATCGAATTACTTATCGAACAGGGAAAAGGGCTGAGCTATGGCCGTATGTTCCATACGACGTGGTTGCGCACCCTTATGCTCCTGGTGTTTACGACAAAAAAGCACCTTCCGGTTACGTTAGAAACGCTTATGATCCGAATGTTTCGAACCTCGCGCGTGCTAGTTCGGCTGAAGTTAGGTATACTACTGCTTTCAGTGATGAGAACCCCGCCGCGTGTGCCGTCATGTGA 471 0.4798 MGVLDHISDLFDCSYRRSSKYKKKRKQFQTVEVKVKMDCEGCERKVKKSVEGMKGVTQVEVERKANKVTVRGYVEPSKVVNRITYRTGKRAELWPYVPYDVVAHPYAPGVYDKKAPSGYVRNAYDPNVSNLARASSAEVRYTTAFSDENPAACAVM 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02937 156 Gene3D - 15 95 - -
Vivi5g02937 156 ProSiteProfiles Heavy-metal-associated domain profile. 28 92 IPR006121 GO:0046872
Vivi5g02937 156 CDD HMA 32 92 IPR006121 GO:0046872
Vivi5g02937 156 FunFam Heavy metal-associated isoprenylated plant protein 26 15 94 - -
Vivi5g02937 156 SUPERFAMILY HMA, heavy metal-associated domain 28 95 IPR036163 GO:0046872
Vivi5g02937 156 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 30 153 IPR045181 GO:0046872
Vivi5g02937 156 Pfam Heavy-metal-associated domain 33 83 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02937 Vivi-Chr5 117391181 117391959 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02937 - - gmx:547973 265.388