Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02934 ATGCAGTTATTTCAGAAACACATAAAATCACAATTTTTGATGAATTTCATATTAGTAGCATCCTCATTTTGTGGCTTTTATGTCATTGTATCAGTCCTAATATTAGGTACTTCAAATCCAAACCTATTACTACATTTGCAACATTCTTCATCACAAGATGTATCAAAAACCGCAACTGCAACAGCAACCACGAACACAACTCTTGATCATATAGTATTTGGAATTGCCTCAAGCAATAGTTCATGGACAAAGCGAAAAGACTATGTCAAACTATGGTGGAAAGCCAACAATACAATGAAGGGCTGTGTTTTCATGGACAGTCTACCTAATAATAATGATGACCCTTCTCTTCCTCCTTTACGTGTCTCTCAAGACACGTCGCGGTTTCGATACACTTGCAGCGATGGACATCGATCAGCAATACGGCTCGCGCGCATAGTTGTGGAGACAGTGGCCTTGAATCATACAGGTGTTAAGTGGTATGTGTTTGGAGACGACGACACGGTTTTCATCCCGGAGAATTTGGTCAAGACTTTGTCTAAATATGACCAGGAGCTTTGGTATTATATTGGCGCGAATTCGGAGATTTATGAGCAGAACCGTTTGTTTGGTTTTGGAATGGCTTTTGGTGGTGCTGGTTTTGCTATTAGTTCGTCTTTGGCTAAAGTTTTTGTTAGGGTTTTTGATTCTTGCATGGAAAGGTATCATCATCTCTATGGAAGTGATGGCAGGGTTTACTCTTGTTTAGCTGAACTTGGTGTTGGATTGACACATGAACCAGGTTTTCATCAGGTTGATTTAACTGGAAACATCTTTGGCCTATTAGCTGCACATCCAATGACTCCTTTAGTATCTCTCCATCACATTGATTACACAGATCCAATCTTCCCAAACATGACAAGAACACAAGCTCTCCAACATTTATTCAAAGCAGTAAATGTTGATTCTCAAAGAATTCTGCAACAAACAATTTGCTATAACAAAAAGTTTTCATGGACAGTTTCAGTATCATGGGGTTACGCTGTTCAAATATTCACTGACCATATGCTTTTACCAGAAGCTGTCAATGTGCAAGAAACATTCAAACAATGGAAAAACGGAGATGTGTTAGCAAAAACTTATATGTTTAATACAAAACCATTTGACTCTAATCCTTGTGAAAGACCCACCATTTTTTATCTAGATCGTGTTTCTTCCGGTATGAATGGTATCATAACCAGTTATTATAAGAGATTTGTAGATGATTGCCGAAAGGAACAGGGTTCGCTGAACAAACTAGAAGTTATCAAAGCCGTCTCGAATAAGCTAGACCTTAACATCAAACAGGCTCCAAGAAGACAATGTTGTGATATATTGCCATCCAGTGCTGGGGACAAACTGGATATTGCTGTTAGAGAATGCAAAGATGATGAATTGATTTATATGCACTGA 1431 0.3843 MQLFQKHIKSQFLMNFILVASSFCGFYVIVSVLILGTSNPNLLLHLQHSSSQDVSKTATATATTNTTLDHIVFGIASSNSSWTKRKDYVKLWWKANNTMKGCVFMDSLPNNNDDPSLPPLRVSQDTSRFRYTCSDGHRSAIRLARIVVETVALNHTGVKWYVFGDDDTVFIPENLVKTLSKYDQELWYYIGANSEIYEQNRLFGFGMAFGGAGFAISSSLAKVFVRVFDSCMERYHHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLTGNIFGLLAAHPMTPLVSLHHIDYTDPIFPNMTRTQALQHLFKAVNVDSQRILQQTICYNKKFSWTVSVSWGYAVQIFTDHMLLPEAVNVQETFKQWKNGDVLAKTYMFNTKPFDSNPCERPTIFYLDRVSSGMNGIITSYYKRFVDDCRKEQGSLNKLEVIKAVSNKLDLNIKQAPRRQCCDILPSSAGDKLDIAVRECKDDELIYMH 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02934 476 PANTHER FRINGE-RELATED 16 473 - -
Vivi5g02934 476 Pfam Protein of unknown function, DUF604 199 449 IPR006740 -
Vivi5g02934 476 Gene3D - 58 334 - -
Vivi5g02934 476 FunFam Fringe-related protein-like 58 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02934 Vivi-Chr5 117342949 117344955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02934 52 476 Glycosyltransferase AT4G15240 49.533 3.84e-152 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02934 - - vvo:131632357 826.624