Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02928 ATGGGTATTCGTCTACCATTTGTTGTTCTTCAAGCAAAACAGATATTCAAGTCTACGTCGACGCCACAGTTTCATAGTGGATCGAAACAGTCCAACAATGTTCCGAAGGGACATATAGCCGTATACGTTGGAGAGTTGCAGAAGAAGCGTTTTGTTGTTCCGATATCATACTTGAACCATCCTACTTTTCTTGACTTGCTTAGCAGAGTCGAAGAAGAGTTTGGATATAATCATCCTATGGGTGGTCTTACGATTCCCTGCAAAGAAGATGCTTTCATCAATATTACCTCCCAACTACGTGCCTTGTGA 309 0.4175 MGIRLPFVVLQAKQIFKSTSTPQFHSGSKQSNNVPKGHIAVYVGELQKKRFVVPISYLNHPTFLDLLSRVEEEFGYNHPMGGLTIPCKEDAFINITSQLRAL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02928 102 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 25 99 IPR003676 GO:0009733
Vivi5g02928 102 Pfam Auxin responsive protein 15 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02928 Vivi-Chr5 117287316 117288036 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02928 9 97 Calmodulin-binding Proteins AT4G34750 40.217 9.73e-16 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02928 K14488 - gmx:100803474 151.754