Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02919 ATGGGTTTCCGCATAACAAGTGTTATCAGAAAAGCATCATTTTCAAGAACTCAAGGATCTACCAAAGGATTTGAAGTTTCTAAAGGATATCTCGCCGTCTATGTTGGAGACAAAATGAGGCGGTTTTTGATTCCAGTATCATACTTGAACCAACCTTTGTTTCAAGAGTTATTAAATAAAGCAGAAGAAGAGTTTGGATATGATCATCCAATGGGCGGTCTCACAATCCCATGCAGTGAAGATGAATTCCTAAACCGCACATATAAAAAAACAATGGGTTTCCGCATAACAAGTATTATACGAAGGGCATCATTTTCCAGAACTCAAGGATTTACCAAGGGATTTGAAGTCCCTAAAGGCTATCTTGCTGTCTATGTTGGACACAAAATGAGGCGGTTTGTGATTCCGGTATCATACTTGAACCAACCACTGTTTCAAGAATTACTAAATGAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGCGGGCTTACAATTCCATGCTGTGAAGATGAATTCCTAAACCTCACTTCTCTCTTGAGTTGA 549 0.388 MGFRITSVIRKASFSRTQGSTKGFEVSKGYLAVYVGDKMRRFLIPVSYLNQPLFQELLNKAEEEFGYDHPMGGLTIPCSEDEFLNRTYKKTMGFRITSIIRRASFSRTQGFTKGFEVPKGYLAVYVGHKMRRFVIPVSYLNQPLFQELLNEAEEEFGYDHPMGGLTIPCCEDEFLNLTSLLS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02919 182 Pfam Auxin responsive protein 104 181 IPR003676 GO:0009733
Vivi5g02919 182 Pfam Auxin responsive protein 13 83 IPR003676 GO:0009733
Vivi5g02919 182 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 113 180 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02919 Vivi-Chr5 117069868 117073436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02919 25 83 Calmodulin-binding Proteins AT3G43120 59.322 3.94e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02919 - K14488 vvo:131602130 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02919 5 117069868 117073436 Vivi5g02919 5 117069868 117073436 ECH