Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02918 ATGGGTTTTCGTTTCCCTAGTATGATCAGAAGAGCGTCATTTTCTTCAAACCGAGGAGTTTCAAAAGTTGTGGACGTTCCAAAGGGATATCTTGCAGTCTATGTTGGAGAAGAAATGAAGCGGTTTGTGATCCCCATTTCATACTTGAACCAACCATCATTTCAAGACTTGTTGAGTCAGGCCGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTAACCATTCCTTGCACCGAAGATGTCTTTCAACACATTACTTCTTGCTTGAATAAGCTATGA 282 0.4149 MGFRFPSMIRRASFSSNRGVSKVVDVPKGYLAVYVGEEMKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDVFQHITSCLNKL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02918 93 Pfam Auxin responsive protein 12 90 IPR003676 GO:0009733
Vivi5g02918 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02918 Vivi-Chr5 117054480 117055333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02918 25 90 Calmodulin-binding Proteins AT3G43120 54.545 5.19e-22 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02918 - K14488 gmx:112997793 157.918