Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02901 ATGGCGGCAAAGAATGTTCCAGAAGTGGTACTAAATTCAGGAGAAAAGATGCCAGCCATAGGATATGGAACAGCAACTCCTCCTCCTCCAACAGCTCTGATTGATGCTATTGACATTGGCTACAGACATTTTGATACTGCTTCTTTCTATAATACTGAAGAACTTCTAGGCCAAGCTGTGTCAAAAGCTTTAGAGCTAGGCCTCATTAAAAATCGCGACGAACTGTTTATTACTTCCAAGTTATGGTGTACTGATGCTCACCATGACCTTGTTCTCCCAGCTCTCAAAACCACTCTCAAAAATCTTGGGTTGGATTATGTGGATCTGTATTTGATTCATTGGCCAGTGAGGTTGAAACAAGATGCTGTAGGCTTTAAAAGTGAGGATATGATTCCTATCGACATAAAAGGAGTATGGGAAGCTATGGAAGAGTGTCATAGATTGGGCTTAGCAAAGTCTATTGGTGTTAGCAACTTTGGAGCCAAAAAACTCTCCTTACTTTTAGAAAATGCCAAAATCACTCCTGCGGTTAATCAGGTGGAAATGAGCCCATCATGGAATCAAGGGAAACTCAGAGAATTCTGCAAGCATAAAGGAATTCATGTGAGTGCATGGTCACCACTAGGAGCATACAAAGATCCTTGGGGTTCCCCTTCAGTGATGGATAATCCAATTCTGCATGAAATTGCTGAGGCTAAAAAGAAAAGTGTAGCCCAGATAATTCTAAGATGGATATACCAGCATGGGGTACCTGCTATTGTGAAAAGCTTCAATAAGGAGAGGATGAAACAAAACATTGAAATATTTGATTGGGAATTGAGCCAAGAAGAGTCTGACAAAATCAATCAGATTCCTCAAATCAGAACCCTAAAAGGAGAAATGTTTATATCAGAAAATGGACCTTACAAATCCTTGGAAGAGTTGTGGGATGGAGATGTTTAA 942 0.4023 MAAKNVPEVVLNSGEKMPAIGYGTATPPPPTALIDAIDIGYRHFDTASFYNTEELLGQAVSKALELGLIKNRDELFITSKLWCTDAHHDLVLPALKTTLKNLGLDYVDLYLIHWPVRLKQDAVGFKSEDMIPIDIKGVWEAMEECHRLGLAKSIGVSNFGAKKLSLLLENAKITPAVNQVEMSPSWNQGKLREFCKHKGIHVSAWSPLGAYKDPWGSPSVMDNPILHEIAEAKKKSVAQIILRWIYQHGVPAIVKSFNKERMKQNIEIFDWELSQEESDKINQIPQIRTLKGEMFISENGPYKSLEELWDGDV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02901 313 Gene3D - 8 313 IPR036812 -
Vivi5g02901 313 ProSitePatterns Aldo/keto reductase family signature 1. 40 57 IPR018170 GO:0016491
Vivi5g02901 313 ProSitePatterns Aldo/keto reductase family putative active site signature. 253 268 IPR018170 GO:0016491
Vivi5g02901 313 CDD AKR_AKR4A_4B 13 286 IPR044497 GO:0016616
Vivi5g02901 313 SUPERFAMILY NAD(P)-linked oxidoreductase 9 285 IPR036812 -
Vivi5g02901 313 FunFam NAD(P)-linked oxidoreductase superfamily protein 7 300 - -
Vivi5g02901 313 PRINTS Aldo-keto reductase signature 97 115 IPR020471 GO:0016491
Vivi5g02901 313 PRINTS Aldo-keto reductase signature 36 60 IPR020471 GO:0016491
Vivi5g02901 313 PRINTS Aldo-keto reductase signature 176 205 IPR020471 GO:0016491
Vivi5g02901 313 PRINTS Aldo-keto reductase signature 142 159 IPR020471 GO:0016491
Vivi5g02901 313 PRINTS Aldo-keto reductase signature 220 244 IPR020471 GO:0016491
Vivi5g02901 313 PANTHER ALDO/KETO REDUCTASE 9 286 - -
Vivi5g02901 313 Pfam Aldo/keto reductase family 34 284 IPR023210 -
Vivi5g02901 313 ProSitePatterns Aldo/keto reductase family signature 2. 142 159 IPR018170 GO:0016491
Vivi5g02901 313 PIRSF AKR 2 307 IPR020471 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02901 Vivi-Chr5 116930154 116932022 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02901 K22374 - gmx:100787305 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02304 6 101958475 101960812 Vivi5g02901 5 116930154 116932022 PCT