Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02892 ATGCCCAACACCTCATCCTCGAAAAAGCACGGTCAAGATCAGCCTGAATTTACTGGTCCCATCCCTGTATCTCTTCGAACCAAAATGGGCAAATCCGAAGACAACGATAAGAAGAATTCAAGTAAGAAAGTCAAAGATGTAGAAATAAGTGTTCCTATAGTGTATGGGAACATAGCATTTTGGCTTGGGAAAAAAGCTAGTGAGTATCAATCGCATAAATGGACTATATATGTTCGTGGAGCATCGAACGAGGACCTGGGGGTTATTGTAAAGCGAGCTGTTTTTCAGTTGCATACTAGTTTCAATAATCCGACGAGGGTTGTGGATGCACCTCCTTTTGAGTTGTCGGAGGCAGGATGGGGAGAATTTGAAATTGCAATCACACTTTATTTCCACAGTGATGTTTGCGACAAGCCTTTGAACTTATATCATCACTTGAAGTTGTATCCAGAGGATGAAAACAGTTCCATGTCCACAAAGAAGCCTGTTGTTGTGGAATCTTATGATGAGGTAGTTTTCCCCGATCCCTCTGAAGCTTTTTTAGCTCGTCTGCAGAATCACCCAGTTGTGAACTTGCCAAGATTACCTCCTGGGCTTACCTTACCTCCTCCCATTCCAGTTGAAGATGCAAGTAAAAGGAGGAGAGGCGATACCAAAGATAATCCCTTAAGCCAATGGTTCCTGAATTTCTCTGAAGCAGATGAACTCTTACAGCTTGCAGCAGCTCGTCAACAGGTTCAAGCTCATATCTCGAAACTCAAACGACAAATAACTTCGATAGATGGACAACATAAGCAGCAACAGCAGCAGCTTAAATCTTCTTCTGACCAATAG 834 0.4269 MPNTSSSKKHGQDQPEFTGPIPVSLRTKMGKSEDNDKKNSSKKVKDVEISVPIVYGNIAFWLGKKASEYQSHKWTIYVRGASNEDLGVIVKRAVFQLHTSFNNPTRVVDAPPFELSEAGWGEFEIAITLYFHSDVCDKPLNLYHHLKLYPEDENSSMSTKKPVVVESYDEVVFPDPSEAFLARLQNHPVVNLPRLPPGLTLPPPIPVEDASKRRRGDTKDNPLSQWFLNFSEADELLQLAAARQQVQAHISKLKRQITSIDGQHKQQQQQLKSSSDQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02892 277 MobiDBLite consensus disorder prediction 1 42 - -
Vivi5g02892 277 Gene3D YEATS domain 44 196 IPR038704 -
Vivi5g02892 277 MobiDBLite consensus disorder prediction 195 219 - -
Vivi5g02892 277 Pfam YEATS family 71 150 IPR005033 GO:0006355
Vivi5g02892 277 CDD YEATS_TFIID14_like 49 180 - -
Vivi5g02892 277 Coils Coil 236 270 - -
Vivi5g02892 277 PANTHER PROTEIN AF-9 HOMOLOG 38 273 IPR005033 GO:0006355
Vivi5g02892 277 ProSiteProfiles YEATS domain profile. 43 187 IPR005033 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02892 Vivi-Chr5 116790183 116795615 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02892 K11341 - gmx:100790602 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02892 5 116790183 116795615 Vivi5g02892 5 116790183 116795615 ECH