Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02881 ATGTCGTCCTCGTTTTTATCGAAGGATCAACATCAACTAATGGAGACAATTCTTGTTCAATTGTTAAGGTTGTCTTGGATCGCTGCCACCTTGCCTATTCTCATCGCTTCCATTCCCATTCCCAAACTCAACTTCCTACGCCAAATCCTGTTGCTGTTCGCTAAGAGGGGAAAAATCATGCACCCCTCTTCTTCTTCCCAAAAATTTACTGTTCCTCAGAGATTCTTCTTGCATTTCTATGTTGTGGCTTCAATATGGACAATGTTTCTGCTTGTTGCAACTTGGGTGTATGCTTATAGAATGGTGCCGCTTGTTGTGGAGCCGTTGTCTTTTCCTACTTTAACTAGTTTTTTGACTGGTGGTTCAACTATTAGAACTTGTTCTGCTGAATTGAGGAATGGTTATGTTGCTTGGCAAGGTGTTTTTATGCTTTTGTTGATGGAAGCTCATGTTCTTCGACGCCTTTTTGAAAGTATATATGTGTTTAATTATAGCCCGTCTGCTCGGATGCATATCGTTGGCTATTTCACTGGATTGTTTTTCTACATAGCAGCACCGTTATCGCTGTGCGGTGATTCTGCATTGGAAGTTTTTGATTGCTTAGCAAATCTAGTGACTGAGTTCATTGTTAGAGGCAAGAATCAGATGCCACTGCCAGAGATAGACTTCTGGCTAGTTTTAAATCCCCTGACCAGGCTTGGGTGGAAGCATTGGGTTGCTGCAGCTGTTTTCTCGTGGGGATGGATTCATCAATACCGGTGCCATAAGATTCTTGGTTCTCTACGCGATTCAAGACACGCAGATGAATATGTAATTCCTCACGGTGATTGGTTTGAAATTGTTTCCTCTCCGCACTATCTCGCCGAAATTGTAATTTACGCCAGTTTTGTGGTTGCTACTGGTGGATCCAATCTAACAATCTGGTTACTTTTTGCTTTTGTGGTGGCAAATCTGGCATTTGCAGCAGTAGAAACACATAGCTGGTATCGTCGAAAATTTGAAGATTATCCAAGCCGTCGGTTTGCTATTATTCCATTTATCCTCTGA 1047 0.4202 MSSSFLSKDQHQLMETILVQLLRLSWIAATLPILIASIPIPKLNFLRQILLLFAKRGKIMHPSSSSQKFTVPQRFFLHFYVVASIWTMFLLVATWVYAYRMVPLVVEPLSFPTLTSFLTGGSTIRTCSAELRNGYVAWQGVFMLLLMEAHVLRRLFESIYVFNYSPSARMHIVGYFTGLFFYIAAPLSLCGDSALEVFDCLANLVTEFIVRGKNQMPLPEIDFWLVLNPLTRLGWKHWVAAAVFSWGWIHQYRCHKILGSLRDSRHADEYVIPHGDWFEIVSSPHYLAEIVIYASFVVATGGSNLTIWLLFAFVVANLAFAAVETHSWYRRKFEDYPSRRFAIIPFIL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02881 348 Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase 236 348 IPR001104 GO:0006629|GO:0016627
Vivi5g02881 348 Gene3D - 216 347 - -
Vivi5g02881 348 PANTHER DFG10 PROTEIN 14 348 IPR039698 GO:0003865|GO:0006488
Vivi5g02881 348 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 240 323 IPR001104 GO:0006629|GO:0016627
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02881 244 345 Acyl Lipid Metabolism Gene Families AT3G55360 31.532 6.43e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02881 K12345 - gmx:100814660 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02881 5 116542629 116545142 Vivi5g02881 5 116542629 116545142 ECH