Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02869 ATGGCCTCTGCAGCATCAGCATCTCTTTTCAAGTCATCGCTTGTTCTTGACAAGTCTGAATGGGTGAAGGGAACACCCCTCCTCCGTCAACCTTCTTCTGTGTCTGTCGTGAGATGCAACCCCGCCGCTCCATCAGGTCTCACCGTCAGAGCTAGTGCATATACTGATGAGCTCGTCAAGACCGCGAAAACAATTGCTTCACCAGGGCGTGGTATTTTGGCGATGGATGAGTCTAATGCTACATGCGGGAAGCGTTTGGCTTCAATTGGACTAGAGAACACCGAAGTTAACCGTCAAGCATGGCGTACACTTCTGGTAACAGTTCCAACACTTGGAGAGTACATCTCTGGTGCCATTCTCTTTGAGGAGACTCTTTACCAATCCACAACTGATGGAAGGAAGATCGTCGATGTGCTTATCGAGCAAAACATTGTTCCTGGTATTAAAGTCGACAAGGGTCTGGTGCCCCTTGCTGGTTCCAATGACGAGTCATGGTGCCAAGGTCTAGATGGTCTTGCCTCCCGTTCAGCTGCATACTACCAACAAGGTGCCCGTTTCGCCAAATGGCGTACTGTCGTGAGCATCCCCAACGGTCCTTCTGCTCTTGCTGTCAAGGAAGCAGCCTGGGGTCTTGCTCGCTATGCTGCAATTAGTCAGGACAATGGATTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGAGAACATGGAATTGACAGAACTTTTGAAGTAGCCCAAAAGGTTTGGGCTGAAGTTTTCTACTACCTTGCTGAGAACAATGTCCAATTTGAGGGTATTCTCCTCAAGCCTAGCATGGTTACTCCAGGAAATGAGTCCAAGGACAAAGCCTCTCCTACAAAAGTCGCCGAGTACACCCTCAATCTCCTCCACAGGAGAATTCCCCCTGCTGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTGAACCTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTGTCGTTCTCATACGCAAGAGCTCTCCAAAATACCGCATTGAAGACATGGGGAGGCCGCGCAGAGAACGTGAAGGCGGCACAAGAAGCACTCCTTTTCCGTGCCAAGTCCAACTCACTTGCTCAACTTGGAAAATACATTGGTGATGGTGAATCTGAGGAAGCCAAGAAGGAATTGTTTGTCAAAGGCTACTCTTATTAA 1206 0.4909 MASAASASLFKSSLVLDKSEWVKGTPLLRQPSSVSVVRCNPAAPSGLTVRASAYTDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGNESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRAENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKELFVKGYSY 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02869 401 NCBIfam fructose-bisphosphate aldolase class I 57 377 - -
Vivi5g02869 401 SUPERFAMILY Aldolase 47 401 - -
Vivi5g02869 401 Gene3D Aldolase class I 41 400 IPR013785 -
Vivi5g02869 401 FunFam Fructose-bisphosphate aldolase 39 400 - -
Vivi5g02869 401 Pfam Fructose-bisphosphate aldolase class-I 57 401 IPR000741 GO:0004332|GO:0006096
Vivi5g02869 401 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 52 401 IPR000741 GO:0004332|GO:0006096
Vivi5g02869 401 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 262 272 IPR029768 -
Vivi5g02869 401 CDD FBP_aldolase_I_a 56 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02869 Vivi-Chr5 115867429 115870155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02869 47 401 Miscellaneous Gene Families AT3G52930 55.432 2.53e-134 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02869 K01623 - gmx:100818383 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02869 5 115867429 115870155 Vivi5g02869 5 115867429 115870155 ECH