Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02813 ATGATGATTGGTACCTCAAATTCCATTACACTCCGAGGACTAGCTTCATTCACTACTCCTCCAAACTTGTACACATCAAATTCAGTATCAAGAGTAGCCACTTTTTCTCCGTCACCATCGATAAGAGCAACATCACGTATTCTCCATACGCCAATTTCAGCTGTTGGTTCAAATTCAGGTTTAGAAGCATCCGTTACAAATTCAAATGATATCTCAGTCTTGTTAACAGATGCCACTGTAGTTTTACAAGAACAAGGTGACGATGAAAATAAAATACAACTAAGAGTGGAGTTGAATGGTGTTCAAACACGCAAGGTGTTTGACCGGATTCTCGTAAACTTAGGCCAGAATGTACCACCAACTCCTGGATTTCGCACGCGAAAAGGAGGGAAAACGGCAGAGATCCCGAAAAGCTTCCTTTTACAGGTGCTTGGGGAAGAAAGTGTCACTAAGTTTGCAATACAAGAAATTCTCAACTGTACCATGGCTGAATATGTGAAAAAGGAAAACTTGGATGCAGAGGACAAGAAGGTTAGAACTATTCAAACGGTCCAAGAACTCAGAAAATCATTCACAGCAGGAAAACAATTTGGCTTCGATGTTATAATTGAGCCTAAAAACAATGAAGGTAACCAGATCGATGGTTAA 648 0.4012 MMIGTSNSITLRGLASFTTPPNLYTSNSVSRVATFSPSPSIRATSRILHTPISAVGSNSGLEASVTNSNDISVLLTDATVVLQEQGDDENKIQLRVELNGVQTRKVFDRILVNLGQNVPPTPGFRTRKGGKTAEIPKSFLLQVLGEESVTKFAIQEILNCTMAEYVKKENLDAEDKKVRTIQTVQELRKSFTAGKQFGFDVIIEPKNNEGNQIDG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02813 215 SUPERFAMILY Trigger factor ribosome-binding domain 87 203 IPR036611 GO:0006457|GO:0015031
Vivi5g02813 215 Gene3D - 84 205 IPR036611 GO:0006457|GO:0015031
Vivi5g02813 215 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 36 204 IPR005215 GO:0015031
Vivi5g02813 215 FunFam Trigger factor 80 206 - -
Vivi5g02813 215 Pfam Bacterial trigger factor protein (TF) 84 204 IPR008881 GO:0006457|GO:0015031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02813 - - tpra:123919008 228.024