Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02812 ATGGTGCATGCATGGCTCTCACTCAAACTCTCAAAGTCACTTCCACTTCCATCCTCTTCTACTTGCACTTCCAAGATTACAAAATGGTTTTGTTATGATTTTCCCAACCAATTTTGCTCCTTGCCATCGCCAGCAATTTCTTATGATAGCTATGAGGAAGGAAGCAGTGCAGTAGAAGACAAGATCACATACAATCCGAATCTGTTCAACAATACACCAGAAGTTCAGCTGAGCAACCTACCACCTCTAGTGAGTGCACTGAAAACCGCAGCTGAAACAAATGTTGCTTCTTTTCATTTCCCTGGACACAACAGAGGCCTCGCCGCTCCTTCTTCCTTGTCTCCAATCATTGGATCAAAAACATATACTCATGATTTATGCGGCATTCCAGAGCTTGGCAACCTCTTTTTCCCCCAAGGACCCGTATTCGAAGCACAAAAAGAAGCAGCCAAAGTGTTTGGATCATCACAAACATGGTTTCTTGTTGGAGGTACTACTTCCGGGATCCAGACAGCAATCATGTCAACATGTTCACCCGGAGATTATCTCATTCTTCCCAGGAACTGTCATGTATCAGCTATATCCGGCATAGTTTTATCTGGTGCAATGCCTAAGTACATTTTTACCGACTCTAATAATGATTGGAATATCCCTGGTGGCATCACTCCGTCACAGGTATTGAATGCTATCCAGGAAGTGGAACTGGAAGGAAAAAAACTAGGAGCAGTTTTCATCACTTCGCCTACTTATAACGGTATTTGCAGTAACTTGAAGGAGATTTCTGAGATATGTCATTCTCGGAAAATTCCTTTGATTGTTGATGAAGCTCATGGTGCACATCTTGGATTTCATCCTGATCTTCCTAGGTCAGCACTCCAGCAAGGTGCTGATCTAGCTGTACAGTCTACTCACAAGGTTCTTTGCTCTCTTACTCAGTCATCTATGCTGCACATGTCCGGCGATATCGTAGATAAGGATAAAATACAAAGGTGTATCCAATCTCTGCAATCCTCAAGCCATAGTTACCTACTTATGGCATCCTTGGATGCTGCTACAGCTCAACTTCGTGAAAGCGCCGATGTTTTGTTCAACCAAGCGCTCGAATTAGCAAATGAAGCAAAGTTACTGCTAAAACAAATCCCTGGCATCTCAGTGCTTGAGCATTCACACTTTCCAAATTTTCCTGCTAAGGATCCATTGCGGATTACAGTAGGTTTCTGGAAGCTTGGTTTATCAGGTTATGAAGCGGATAAAATGTTATTAAAGGATTTCGGAATCACCCGCACACTTGTTGGGACTAAATCTGTGGCTTATTCAATTAATCTCGGAACTAGCAGGGACCATGTTCACAGGCTTGTATCAGGAATAAAGCATCTAGCTGCAAGATTTTCTTCCATTCAGCAACCTAAAGAAACTCCTAACCATGCTCCCTTAGGCTTGGATGATGTTATCATGAGATTGAGTCCTAGAGAAGCATACTTTGCAAGTAAGATAAAAGTATCGGCGAAGGAGAGCATTGGTAAGGTTTCTGGTGAGCTTTTGTGTCCATTCCCTCCAGCCGTACCGGTAGTGGTTCCTGGTGAAGTTATTACACAGAAAGCTATTGATTTTCTCCTCCATTCAAAAAGTACAGGTGCTTCTATTAGTGGAGCTTCAGATCCCTCACTTACTTCTGTAGTTGTCTGCAATGGTGATAACTATTAA 1704 0.4261 MVHAWLSLKLSKSLPLPSSSTCTSKITKWFCYDFPNQFCSLPSPAISYDSYEEGSSAVEDKITYNPNLFNNTPEVQLSNLPPLVSALKTAAETNVASFHFPGHNRGLAAPSSLSPIIGSKTYTHDLCGIPELGNLFFPQGPVFEAQKEAAKVFGSSQTWFLVGGTTSGIQTAIMSTCSPGDYLILPRNCHVSAISGIVLSGAMPKYIFTDSNNDWNIPGGITPSQVLNAIQEVELEGKKLGAVFITSPTYNGICSNLKEISEICHSRKIPLIVDEAHGAHLGFHPDLPRSALQQGADLAVQSTHKVLCSLTQSSMLHMSGDIVDKDKIQRCIQSLQSSSHSYLLMASLDAATAQLRESADVLFNQALELANEAKLLLKQIPGISVLEHSHFPNFPAKDPLRITVGFWKLGLSGYEADKMLLKDFGITRTLVGTKSVAYSINLGTSRDHVHRLVSGIKHLAARFSSIQQPKETPNHAPLGLDDVIMRLSPREAYFASKIKVSAKESIGKVSGELLCPFPPAVPVVVPGEVITQKAIDFLLHSKSTGASISGASDPSLTSVVVCNGDNY 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02812 567 SUPERFAMILY PLP-dependent transferases 81 460 IPR015424 -
Vivi5g02812 567 Gene3D - 81 361 IPR015421 GO:0003824
Vivi5g02812 567 Pfam Orn/Lys/Arg decarboxylase, major domain 81 382 IPR000310 GO:0003824
Vivi5g02812 567 Gene3D - 460 566 - -
Vivi5g02812 567 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 499 546 IPR008286 GO:0003824
Vivi5g02812 567 PANTHER ARGININE DECARBOXYLASE 70 563 - -
Vivi5g02812 567 SUPERFAMILY Ornithine decarboxylase C-terminal domain 419 565 IPR036633 GO:0003824
Vivi5g02812 567 CDD Orn_deC_like 82 374 IPR000310 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02812 Vivi-Chr5 114963334 114965670 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02812 - - psat:127101168 705.671