Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02809 ATGCTGCACATGTCCGGCGACATCGTAGATAAGGAAATAATATCTAGGTGTCTCCAAGCTCTCCAATCTACTAGTCCTAGTTACCTGCTTTTGGCTTCTCTAGATGCTGCTAGAGCTCAACTTAATGAAAGCCCTGATGTTATATTCAACCAAGCCATTGAATTAGCAAATAAAGCAAAGAGCTTGCTAAAACAAATCCCTGGCATCTCAGTGCTTGAGCATTCACACTTTCCAAATTTTCCTGCTAAGGATCCATTGCGGCTTACCGTAGGTTTTTGGAATCTTGGTTTATCGGGTTACAAAGCAGATAAAATCTTATTAAGGGATTTTGGAATCGTCCGTGAACTTGTTGGGAATAAATCTGTCACTTATGTACTAAATCATGGAACTTGTAGGGAGCATGTTCAAAGGCTTATATTAGGAATAAAGCATCTAGCTGCAACATGTTATTCCATTCAAAAAACTAACGAAACCGATCATGCACCCTTGGATGATATAATCATGAAACTGATCCCTAGAGATGCATTTTTTGCAAGTAAAAGAAAAGTAACAATCAAGGAAAGCATTGGTAAGATTTGTGGAGAGCTTATATGTCCATACCCTCCAGGGATACCAGTACTGATCCCTGGCGAGGTTATCAGCTCGAGTGCTGTCAATTATCTTCTCCATGTAAGAAGTAAAGGTGCTGATATTTTAGGAGCCTCTGATCCCCTACTTTCTTCTATAGTTGTCTGCAATGGTGAGAACTATTAG 753 0.3971 MLHMSGDIVDKEIISRCLQALQSTSPSYLLLASLDAARAQLNESPDVIFNQAIELANKAKSLLKQIPGISVLEHSHFPNFPAKDPLRLTVGFWNLGLSGYKADKILLRDFGIVRELVGNKSVTYVLNHGTCREHVQRLILGIKHLAATCYSIQKTNETDHAPLDDIIMKLIPRDAFFASKRKVTIKESIGKICGELICPYPPGIPVLIPGEVISSSAVNYLLHVRSKGADILGASDPLLSSIVVCNGENY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02809 250 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 170 226 IPR008286 GO:0003824
Vivi5g02809 250 SUPERFAMILY PLP-dependent transferases 1 143 IPR015424 -
Vivi5g02809 250 Gene3D - 1 46 IPR015421 GO:0003824
Vivi5g02809 250 Gene3D - 144 248 - -
Vivi5g02809 250 Pfam Orn/Lys/Arg decarboxylase, major domain 1 67 IPR000310 GO:0003824
Vivi5g02809 250 SUPERFAMILY Ornithine decarboxylase C-terminal domain 104 248 IPR036633 GO:0003824
Vivi5g02809 250 PANTHER ARGININE DECARBOXYLASE 1 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02809 Vivi-Chr5 114824263 114825020 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02809 - - psat:127101168 396.356