Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02786 ATGGACGATCGCTTCTCCGATTTGAACCCTAAAACTAAAACGTGCGTGGTTTTAGGCGGAAGAGGATTCATAGGAAAAGCGTTGGTTTTACGCCTGTTGAAACTCGGTAACTGGATCGTCCGAGTTGCCGATTCCACTCACTCACTCCAACTTCACAGCTCCGAGTCACTCCTCGCTGAAGCTCTCTCTTCTTCTCGCGCCTCGTACTTCCATCTCGACATTACCGATAAACACCGCGTCGCTAAAGTTCTTGAAGGTTCTTCCGTTGTTTTTTATTTGGATATTGATGGCATCAATTATGACAATGATTTCTACAGCTGCTATAAGTTGATAGTTCAAGGTGCGAAGAATGTGATTAGTGCGTGCAGAGAATGTAAAGTGAAACGACTAGTATACAATAGTTCTGCAGATGTTGTATTTGATGATTTGCATAATGGAGTTAAATCATCGGCATATCAGTGGAAAGTTGGTAATATGTTAATAGATCTTAAGGCTCATGCAGAAGCTTTAATCTTGGATGCTAATGATATTGATGGAGTATTGACATGCTCACTTCGTCCTAGTAATGTCTTTGGTCCTGGTGACACAGAAATTGTGCCGTATTTTCTCAAGTTAGCAAGATACGGTTTTACAAAGTTTATTATAGGGGCTGGTGATAATCTGTCAGACTTCACCTTTTATGAGAATGTTGCTCATGCCCATATCTGTGCTGAAGAAGCCTTAAATTTTCAAACTGTCTCTGTGGCTGGAAAGGCATTTTTTATCACGAATCTTGAGCCTATGAAGTTCTGGGAATTTCTCTCACTTTTATTGGAAGGGCTTGGATACCAAAGGCCATTCATCAAACTTCCTGGCAATTTGGTGCAATACATTCTCTCAGTTTTAGTTTGGTTACATGAGAAGTTGGGACCCAGATGCTTCAATTATCCTTTATTAGTTCGTTTTTTTCAGTTAGCATCACACACCCAAACATTCAACTGCTCAGCAGCTCAAAAAGATATTGGATACTCGCCTATAGTCTCCCTTGAGGAAGGTGTCACGTTAACCATCGAATCATTTGCTCATTTAGCTAAAGATTCATCTTTTTCAAGTTGCTCCGGGTGTGTCGATCGGTCAAAAGCAGATAAGCTGCTTGGCTGTGGAAAAGTGGCTGACATTTTGTTATGGAGAGACGAGAAAGCATCCTTCGCATATTTTCTTGGGCTGGTTTTTTTGTTTTATTGGTTTTTCCTTTCTGCAAGCAGTTTTATATCATCTGGTGCAAGGCTTTTGCTGCTTGCCACTTTACTACTATGCGGACATGGTTTTCTGCCATCAAAGCTGTTTGGTCCCCCTACACAGAGACTGCCCGAATCTAATTTTAAGATCTCTAATACGGTGGTGAAAGATTCAGTTGCAATTACAGTACATATATGGAACAAGGGGTTTCAAAATATAAAGGGACTGGCCCAAGGGGATGATTGGTCTAAATTTTTCAAGGTTGCGGTTCTTATATACCTTCTGAAGTTGATCATCTCAAAGTTCTTGACAACATTAATAGGCACAGGTCTGGTCCTTGCATTTATGGCATTCTTTGTCTATGAGCAATATGAATCAGAAATTGATGGACTAGCAGGTCTTCTAACTACTAGTTTAAAGGAGTTCACGATATATTTGATGGGAAACTTACCTCTTTCTGTATCGCGACTTCTGCATTATGGTGACAACTTTCAGCGTTACCAAAAAGAGGTTTCTTCGTAG 1740 0.4046 MDDRFSDLNPKTKTCVVLGGRGFIGKALVLRLLKLGNWIVRVADSTHSLQLHSSESLLAEALSSSRASYFHLDITDKHRVAKVLEGSSVVFYLDIDGINYDNDFYSCYKLIVQGAKNVISACRECKVKRLVYNSSADVVFDDLHNGVKSSAYQWKVGNMLIDLKAHAEALILDANDIDGVLTCSLRPSNVFGPGDTEIVPYFLKLARYGFTKFIIGAGDNLSDFTFYENVAHAHICAEEALNFQTVSVAGKAFFITNLEPMKFWEFLSLLLEGLGYQRPFIKLPGNLVQYILSVLVWLHEKLGPRCFNYPLLVRFFQLASHTQTFNCSAAQKDIGYSPIVSLEEGVTLTIESFAHLAKDSSFSSCSGCVDRSKADKLLGCGKVADILLWRDEKASFAYFLGLVFLFYWFFLSASSFISSGARLLLLATLLLCGHGFLPSKLFGPPTQRLPESNFKISNTVVKDSVAITVHIWNKGFQNIKGLAQGDDWSKFFKVAVLIYLLKLIISKFLTTLIGTGLVLAFMAFFVYEQYESEIDGLAGLLTTSLKEFTIYLMGNLPLSVSRLLHYGDNFQRYQKEVSS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02786 579 ProSiteProfiles Reticulon domain profile. 383 579 IPR003388 -
Vivi5g02786 579 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 13 354 - -
Vivi5g02786 579 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 354 IPR036291 -
Vivi5g02786 579 Gene3D - 5 357 - -
Vivi5g02786 579 Pfam Reticulon 383 538 IPR003388 -
Vivi5g02786 579 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 16 284 IPR002225 GO:0003854|GO:0006694|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02786 Vivi-Chr5 114460744 114467621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02786 14 360 Lipid Metabolism Gene Families AT2G33630 29.333 1.46e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02786 K23558 - gmx:100794808 850.506