Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02781 ATGGATTTGGAATCGGTTGGTGATTTAGCGATTCACATGATTATGGAAAATCTAAAACCCGAAGACATTGCCACCGTTTCCTGTGTCAGCAACAGGTTTAGGTCTTTCACTTCCGATGACTCTCTCTGGTTCAAAATCTGCTCCACTGAACTCTCTCTCACTCAACCAATTGATCATCTCGGAAACCCTCTCCCTTCCTTCAAGGAAGCTTATCAAACATGGAGAGAAGCTTTTGTTATGTATCCTTGGTCGCTTGTTAAGCGTGTGAAAAGGTGTTGGGACAATATAAAAACGTGGCTCGCCGATAATTTTCCGGAAGCTAAGGACACTCTTTGTGAAGGTGCGACGGAAGCTGAGATTCAGGAGTTGGAGGATGTTTTACATGTTAAATTGCCTCTTCCTACGAGGATTCTTTACCGTTTTCATAATGGGCAAGAGATCGGAAAGCTAGATCTTGATATTGATACCGACACCTTTGGTACTAGTTTGGGGATAATCGGAGGTTACTCCTTCTATGATCATTTGGTGAATGTTTATTTGTTACCAATTAGTCAAGTAATCCAAGAGACTCAGCAAATTTCGCAGAATTTGGGATTTTTAAGAAGGTCTAAGTATGTTCTTGTGGCTGCTTCGTCCACGTATAGTGAGAAGTTTTTTTTCTTAAACTGTACCAATGGTCAACTGTATGTTGGGACCAGGAATCTTCTTACCAATAGAGACATGATGCCGTGTGTTCCTCATAATTTGATTAGTTTGCATCATGAGTTGGATGGCGAAAATATACAGGATGCCATGCTACTGTGGTTAGAAGAACATGGTCGCCGTTTACAACGTGGCTTTATCAAACTGATTGAAGAAGGAAATGACAAAAGCATTAATCTTTTCCCAGAAGAATCCCCTCTCTGTTCAACTGCTGTAACCAACGGTGTGCAGGTTCGTGCCTCTGCGTTGGTTATCCCTGAGTTGGTTGATGTTCAAGATGACCGTGAGAAGTACCTATTTTCTTATTCCATCCGCTTGTCCTTACAACCTCAAGGATGCGAGATCAATGGAATGTCATACCGCTCTTGCCAGCTGTATTGGAGGCACTGGATCATTCATGCTAATGATGTTGTAGTATCTGATGTCGATGGAGAAGCTGTTATAGGAATGTACCCACTTTTGCGTCCAGGTGAGAAAGAATTTGTTTATCAGAGTTGCGCATCTCTACCAACATCATCTGGTACCGTTGAAGGTTCATTTACCTTTGTACCTGGAAGATTGGTAGACCCAAGAGGAGATCCATTCCTAGCTACAGTTGCACGTTTCCCTCTTCAGCTGCCAGACTATATTTTCTGA 1338 0.423 MDLESVGDLAIHMIMENLKPEDIATVSCVSNRFRSFTSDDSLWFKICSTELSLTQPIDHLGNPLPSFKEAYQTWREAFVMYPWSLVKRVKRCWDNIKTWLADNFPEAKDTLCEGATEAEIQELEDVLHVKLPLPTRILYRFHNGQEIGKLDLDIDTDTFGTSLGIIGGYSFYDHLVNVYLLPISQVIQETQQISQNLGFLRRSKYVLVAASSTYSEKFFFLNCTNGQLYVGTRNLLTNRDMMPCVPHNLISLHHELDGENIQDAMLLWLEEHGRRLQRGFIKLIEEGNDKSINLFPEESPLCSTAVTNGVQVRASALVIPELVDVQDDREKYLFSYSIRLSLQPQGCEINGMSYRSCQLYWRHWIIHANDVVVSDVDGEAVIGMYPLLRPGEKEFVYQSCASLPTSSGTVEGSFTFVPGRLVDPRGDPFLATVARFPLQLPDYIF 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02781 445 SUPERFAMILY ApaG-like 306 445 IPR036767 -
Vivi5g02781 445 SUPERFAMILY SMI1/KNR4-like 92 226 IPR037883 -
Vivi5g02781 445 SUPERFAMILY F-box domain 11 79 IPR036047 GO:0005515
Vivi5g02781 445 Gene3D - 93 232 IPR037883 -
Vivi5g02781 445 Gene3D ApaG domain 302 444 IPR036767 -
Vivi5g02781 445 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Vivi5g02781 445 SMART fbox_2 6 46 IPR001810 GO:0005515
Vivi5g02781 445 Pfam F-box domain 10 45 IPR001810 GO:0005515
Vivi5g02781 445 ProSiteProfiles ApaG domain profile. 304 445 IPR007474 -
Vivi5g02781 445 Gene3D - 6 92 - -
Vivi5g02781 445 PANTHER F-BOX PROTEIN SKIP16 1 445 - -
Vivi5g02781 445 Pfam ApaG domain 326 417 IPR007474 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02781 K10290 - gmx:100809876 701.819