Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02778 ATGGGGAAGCCTTTGATTTATGAGATCTTAGAAAAACCTGCAACAAGTTGTATTATAGGAATATGTAGTGCAATTTGGTTTTATATACAGAAGAAAAACATTGGTTATTCACATGTTGGTTTGAGTTATGAGACTGCAATAGAAGGACAATACTGGAGGATAATCACTTCTGCATTTTCTCATATAAGTATAATTCATCTTGTTTTCAATATGAGTGCATTGTGGAGTCTTGGTGTGGTTGAGCAATTGGATCATGTTGGTCTTGGTGTTGAGTATTATTTGCAGTATACACTTGTGTTGGTTGTTGTGTCAGGAATTTTGGTTCTGGCAATGTATCATTTGTTGATTCAGAGATTCAAGGTTGAGTATTTTCGACGAGTTACAGCTGTTGGTTATTCGTGTGTTGTTTTTGGTTGGATGACGATTCTTTCCGTGAAGCAACCTTCTTCGAAGCTGGAGCTCTTTGGATTACTTTCGCTTCCTATTAGTTTTGCTCCGTTTGAGTCGCTTATTTTCACTTCGATTATTGTTCCGCAGGCAAGTTTTATTGGTCATTTATCGGGGATTGTTGTTGGATATGCTATTGCTTGGGGTTTGATTCATGGGATGACGAATTATTGGGCTCTTTCGTTGTTGGGTTGGATTGTTGCTGTCTTTGTTTTTAGTTTGAAGAAATCTGGTGCACTTGACCTCAACTTCATCGAGATTGAATCTGTTACTGATCCTTCGTTACCATCTGTACGGTTTCTGGCATCCGGCAATGGCAGAACCCTGCAGATGAATGCATTGCCTGATGGAAATGTTGAAATTGTCTAA 816 0.386 MGKPLIYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGQYWRIITSAFSHISIIHLVFNMSALWSLGVVEQLDHVGLGVEYYLQYTLVLVVVSGILVLAMYHLLIQRFKVEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGLLSLPISFAPFESLIFTSIIVPQASFIGHLSGIVVGYAIAWGLIHGMTNYWALSLLGWIVAVFVFSLKKSGALDLNFIEIESVTDPSLPSVRFLASGNGRTLQMNALPDGNVEIV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02778 271 FunFam RHOMBOID-like protein 13 9 201 - -
Vivi5g02778 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016020
Vivi5g02778 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Vivi5g02778 271 Gene3D - 10 199 IPR035952 -
Vivi5g02778 271 PANTHER RHOMBOID PROTEASE 15 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02778 Vivi-Chr5 114397619 114399581 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02778 - - gmx:100818954 491.115