Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02775 ATGGCAGCTTCTTCGCTGTTCCGCGTTATTCAGAGAGGTTCCAATGTTATCAAATCCTCGTATGCTGCTACCTCGTTTTTGGTCTCTCCCAGGTTAGTTGGGAGGGGTCAATTGTATTGTATTGGTTCTCCATTGAGGGATTGTGTGCCTTTTGAGAAGCAAGGTTTTTGGTGGGGTTTGAGGGGGTTGAGTTATGGGAAGGTTAATCTTGTGATAAGGGATGGGAAGACAAAGTTTGAGACTCATGAGGTTGAGGCTCCTAGGAAAGATAAGTGGAAGACTAAGAAGAGGTTGAAGATGCAGAGGAAGAGAGAGAAGGAGAAGAGGAAAGCGGCGAATAGGAGAGATCCTCGTCGACTTGGTGTTAAAGGGAAGAAGAAGAAGCAGAAGTTTGCTAGTCCTGAAGAGAGAATCAAGTTCAAGATTGACAATGCGAGAGTCAAAGAAGCGTTGCTCATTGAAAGACTCAAACGATATGAAGTTGCTAAAGCACATGGTCCAGATGTAAAACCAGACGGCTTGACGGGGGAGGAACGGTTTTATCTAAAGAAAATGGCTCAGAAGAGTTCTAATTATCTTCAAGTTGGAAGAAGAGGATTATTTGGAGGGGTTATTCTCAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGTGCATATGCAAACCTTGTAAACCTGGTCAAGTACATGAGTATGCACAAGAACTTGCCAGATTGAGTGGCGGTATTCCAATTCACATCATTGGTGATGACACTATAATATTTTATCGCGGAAAGAACTATATACAACCTGAGGTTATGTCGCCGGTAGATACATTATCCAAGAAAAAGGCACTTGAAAAATCAAAGTATGAGCAATCACTCGAGTCAGTGAGACGCTTCATTGCTATTGCGGAGAAAGAATTGGAGCTATATCATAGACATGTTGCACTTTATGGCGACCCTAGCAACCGTAATCCCTTATCTATACTCGACGGTCCTAGTGGAAGCTCCAACGAAAAGAGGAATCATGATGAAAAGAACCTTGACTTGAGTAGCTATTATCTGTCAGAGACAGAAGCAGATTCCTCACAGACGGACCTATCAGAATCCGAAGATAACTTTGAAAATGGAAACTTGTCAACGAGTGAATCAGATTCTGAAGAAGAAGAAGAAGAAGAAGAAGACAGCATGTTGGGTTCGGATGATGATGATGATCAAGAAAGAGAAGTATCAACATCTAAACATACCCATCATCTCAAGAATCAACTTATATCTTAA 1263 0.4157 MAASSLFRVIQRGSNVIKSSYAATSFLVSPRLVGRGQLYCIGSPLRDCVPFEKQGFWWGLRGLSYGKVNLVIRDGKTKFETHEVEAPRKDKWKTKKRLKMQRKREKEKRKAANRRDPRRLGVKGKKKKQKFASPEERIKFKIDNARVKEALLIERLKRYEVAKAHGPDVKPDGLTGEERFYLKKMAQKSSNYLQVGRRGLFGGVILNMHMHWKKHETVKCICKPCKPGQVHEYAQELARLSGGIPIHIIGDDTIIFYRGKNYIQPEVMSPVDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYHRHVALYGDPSNRNPLSILDGPSGSSNEKRNHDEKNLDLSSYYLSETEADSSQTDLSESEDNFENGNLSTSESDSEEEEEEEEDSMLGSDDDDDQEREVSTSKHTHHLKNQLIS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02775 420 Coils Coil 95 115 - -
Vivi5g02775 420 MobiDBLite consensus disorder prediction 85 133 - -
Vivi5g02775 420 SMART CRS1_YhbY_2 174 258 IPR001890 GO:0003723
Vivi5g02775 420 MobiDBLite consensus disorder prediction 92 109 - -
Vivi5g02775 420 Pfam CRS1 / YhbY (CRM) domain 174 258 IPR001890 GO:0003723
Vivi5g02775 420 SUPERFAMILY YhbY-like 174 268 IPR035920 -
Vivi5g02775 420 ProSiteProfiles CRM domain profile. 172 269 IPR001890 GO:0003723
Vivi5g02775 420 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 65 408 IPR040286 -
Vivi5g02775 420 MobiDBLite consensus disorder prediction 316 420 - -
Vivi5g02775 420 MobiDBLite consensus disorder prediction 346 376 - -
Vivi5g02775 420 MobiDBLite consensus disorder prediction 377 401 - -
Vivi5g02775 420 Gene3D - 174 272 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02775 Vivi-Chr5 114295222 114297748 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02775 - - psat:127100837 647.121