Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02693 ATGTTTTCCTTTGTTTTGTTTCAAAAAGAGACAAAATTAGAGAAGAGAAGAATCAAAGGTTACGTTCGTTTGACGAATCGATCAGCACAAGAAGTAAAATATGAAGCTGAATTTGAAGTACCAGCAAATTTTGGAGAGATTGGTGCTATTCTTGTGGAAAATGAACATAGAAAGGAAATATTCATGAGAGAAATTGTTCTTGATGGATTTCTCACTGGTCCTGTTAAATTTTCTTGTGAATCTTGGGTTCGTTCCAAGTTTGACAACCCTACTAAGAGAGTGTTTTTTTCAAACAAGTCATATTTGCCTTCTGAAACACCAGAAGGATTGAAAATGTTAAGAGAAGGGGAACTGATAAGTTTACGAGGCAATGGACAAGGCGAACGCCAATGGTTTGATCGAATATATGACTATGATGTGTATAATGACCTTGGAGATCCTGACACCGATCCCAAACACAAGAGACCTGTTCTCGGTGGCAGTGAACATCCATATCCTAGACGTTGTAGAACCGGAAGACCTCGTTGTAATACTGATCCATTGTCTGAGAAAAGAAGCAGCAGTGTCTACGTGCCTAGGGACGAATGCTTCTCTAGTGTAAAACAACTCGTAATTTCAGAAAATACCTTACAGTCTGTTTTCAATCCTCTTTTCTCGGGTTTGAAAACATCTGTAATTGACAAGAATCTTGGATTCCCTCTTTTCTCATCCATAGATGACCTTTTCAATGAAGGATATACCTTGCCTCCTCAAAAGGAGAAAGGATTTCTTAGGACTGTGTTGCTGCGGTTGGCCAGGCTTGTCAGTGATGCTACGGTTCTTCGTTTTCAGACTCCCGCCACAGTGGATAAGGACAGATTCTTTTGGTTTAGAGATGAAGAATTTGGAAGACAGACTATAGCTGGTCTTAATCCTTGTTGCATCCAATTGGTTACGGAATGGCCATTGAAAAGCAAACTTGACCCTAATATTTATGGTCCTGCGGAATCAGCAATAACTACGGAAATAATTGAACAACAAATCGGAGGACTCCTTACTGTTGAAGAGGCCATAGAACAGAAGAAGTTGTTCATTCTAGACTACTATGATTTTTTCATGCCATTAGTAGAGGAAGTTAGAAAACTTGAAGGCACAACATTGTATGGCTCGAGGACTTTGTTCTTTCTAACACCCGATGGCGCATTAAGACCACTAGCAATTGAGCTAGCTCGGCCGCTGATGAATGGAAAGCCACAGTGGAGGCAAGTGTTCACACCTTCTTGGCACTCAACTGAAGTTTGGCTTTGGAGACTTGCCAAAACTCATGTCCTTGCTCATGATGCTGGCTTTCACCAACTTGTTAGTCACTGGTTGCGAACTCATTGTAGTACAGAACCATACATCATTGCAACAAACAGGCAACTCAGTGCAATGCATCCAATCTACAGATTATTACTTCCACATTTTAGATACACACTGGAAATCAATGCACTTGCACGTGAAAAGCTAATAAATGTCGATGGAATAATAGAGAGTTAA 1518 0.4025 MFSFVLFQKETKLEKRRIKGYVRLTNRSAQEVKYEAEFEVPANFGEIGAILVENEHRKEIFMREIVLDGFLTGPVKFSCESWVRSKFDNPTKRVFFSNKSYLPSETPEGLKMLREGELISLRGNGQGERQWFDRIYDYDVYNDLGDPDTDPKHKRPVLGGSEHPYPRRCRTGRPRCNTDPLSEKRSSSVYVPRDECFSSVKQLVISENTLQSVFNPLFSGLKTSVIDKNLGFPLFSSIDDLFNEGYTLPPQKEKGFLRTVLLRLARLVSDATVLRFQTPATVDKDRFFWFRDEEFGRQTIAGLNPCCIQLVTEWPLKSKLDPNIYGPAESAITTEIIEQQIGGLLTVEEAIEQKKLFILDYYDFFMPLVEEVRKLEGTTLYGSRTLFFLTPDGALRPLAIELARPLMNGKPQWRQVFTPSWHSTEVWLWRLAKTHVLAHDAGFHQLVSHWLRTHCSTEPYIIATNRQLSAMHPIYRLLLPHFRYTLEINALAREKLINVDGIIES 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02693 505 ProSitePatterns Lipoxygenases iron-binding region signature 2. 471 481 IPR020834 GO:0016702|GO:0046872
Vivi5g02693 505 FunFam Lipoxygenase 306 440 - -
Vivi5g02693 505 Pfam PLAT/LH2 domain 31 96 IPR001024 GO:0005515
Vivi5g02693 505 ProSitePatterns Lipoxygenases iron-binding region signature 1. 444 458 IPR020833 GO:0016702|GO:0046872
Vivi5g02693 505 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 21 101 IPR036392 GO:0005515
Vivi5g02693 505 ProSiteProfiles PLAT domain profile. 1 97 IPR001024 GO:0005515
Vivi5g02693 505 Gene3D PLAT/LH2 domain 7 118 - -
Vivi5g02693 505 Pfam Lipoxygenase 109 505 IPR013819 GO:0016702|GO:0046872
Vivi5g02693 505 PANTHER LIPOXYGENASE 24 505 IPR000907 GO:0016702|GO:0034440|GO:0046872
Vivi5g02693 505 Gene3D - 221 305 IPR027433 -
Vivi5g02693 505 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 100 505 IPR013819 GO:0016702|GO:0046872
Vivi5g02693 505 MobiDBLite consensus disorder prediction 147 184 - -
Vivi5g02693 505 PRINTS Lipoxygenase signature 426 443 IPR013819 GO:0016702|GO:0046872
Vivi5g02693 505 PRINTS Lipoxygenase signature 464 484 IPR013819 GO:0016702|GO:0046872
Vivi5g02693 505 PRINTS Lipoxygenase signature 444 461 IPR013819 GO:0016702|GO:0046872
Vivi5g02693 505 MobiDBLite consensus disorder prediction 147 180 - -
Vivi5g02693 505 PRINTS Plant lipoxygenase signature 132 148 IPR001246 GO:0016491
Vivi5g02693 505 PRINTS Plant lipoxygenase signature 229 250 IPR001246 GO:0016491
Vivi5g02693 505 PRINTS Plant lipoxygenase signature 313 332 IPR001246 GO:0016491
Vivi5g02693 505 PRINTS Plant lipoxygenase signature 67 85 IPR001246 GO:0016491
Vivi5g02693 505 PRINTS Plant lipoxygenase signature 274 290 IPR001246 GO:0016491
Vivi5g02693 505 PRINTS Plant lipoxygenase signature 93 114 IPR001246 GO:0016491
Vivi5g02693 505 PRINTS Plant lipoxygenase signature 381 405 IPR001246 GO:0016491
Vivi5g02693 505 PRINTS Plant lipoxygenase signature 164 183 IPR001246 GO:0016491
Vivi5g02693 505 Gene3D - 306 440 - -
Vivi5g02693 505 Gene3D - 441 505 - -
Vivi5g02693 505 Gene3D - 120 217 - -
Vivi5g02693 505 SMART LH2_4 4 98 IPR001024 GO:0005515
Vivi5g02693 505 SUPERFAMILY Lipoxigenase 102 504 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02693 Vivi-Chr5 113017105 113024490 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02693 40 505 Acyl Lipid Metabolism Gene Families AT3G45140 54.025 1.16e-180 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02693 K00454 - gmx:100787202 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02693 5 113017105 113024490 Vivi5g02693 5 113017105 113024490 ECH