Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02680 ATGGAGAAATATTTGGTATCGAAAAAGCCTTGTAGAGAACGAGTTAAGCATCCTCTTAGGTTTCGATGGAAGAGCAGTTTAGTTGAATTGAATGGGAAATTTGAGGCGAATTATTGTCATGAAATGATGGACTTGCTTATGCGTTCGTATTCTGAGGTTGGATGTTTTCAGCATTTGTATACAAGGGAAAATGGGACAATTTGCTACTCTAATATTAATCGAATACTCACCGATGCACATACTCAGGCTAATCTTTTATATAGAAGAAGGAACGGTGTAACTTCTGTAGACTTTGACAAGAAGGGAATATACTTGGCGTCTGTCACGAGATCAGGTTGCTTAACAGTTCATGACTTTGAAGCTCTTTATTGCCGGACAAACAAATTAACTTGCTTGCAAGAAGACGAGAGCAAACTTTTACTGCATCTCTCACCTGATCACCAACTTGATGTCGTCAAATGGAATCCTCTTGACCAGAATGAGGTTCTTTGTGCCTCTATGAAACGTAATGTACTACTCATATTTGATGTTGCATATATGATGTCAGAACCAATTGATGAGTTACGTACAAGAAATACCGCCACCGTTAGTGGATCCAACATACCCAAAGGTCTATCTGATGTTGCTTTTGCATCAAATGATTCAAGGATCTTTGCTTCTGATACGCATGGCACAGTTAATGTTTGGGATAGAAGAGCGAAGGGTCTACCCTGCCTCGAACTTACTTCTGCTTCATTTGGTACCCTTAACAGCATCCAATTAGATGCAGAAAATCAGATTGTTTTTGGTGCTGGGAGGCATGGGATTGTGTATGTGTGGGATATACGTGGTGGAAGAGCATCTACTTCATTCCTAACTCACAAAGAGATATGCCATCCACCATTAACATCAGTGAAGTTGGCAACATTACTAGAGAAGATTGGATCCTTGAAGGCACAAGCAGAAATTGTTCCCAAGGAGATTCACTCTATTGGTCTTAATCCGTCCTTCCCAAATCAGTTAGCATTCCATATAGCAGACGGCTGGTCGGGCATTTTGGATATTCATAATTTTAAAGTTACACATATTCATTGCCCTCCCCCAGCTTGGTTAAATGATTCCTATGCTTCCCTTGATCAAACAGATTTAAGAAAACCTTCATGGTTATCGACATGTTCGATCTATTTGGCAGGGTCACCAGTTAATTGCGGCCTTCATATGTTAGATTTCTACCCGAGTATCAGCTCACCGTGTCACGTGGATTACAAGGAGGATATACCAGAATTTTCCAGTTCGACAAAACAAAAGAATCAAAATAGATTCATTCCTTTAACTGAAGAAGTTTTGTCATGTGCTGCTCATCCTTTGTACAATGCCATCGTAGCCGGAACAAAGGGAACATCTTTGCTTGTGGTTTCGCAAAAACGCAAGTCATGCAAAGGAGAAGATTAG 1431 0.4025 MEKYLVSKKPCRERVKHPLRFRWKSSLVELNGKFEANYCHEMMDLLMRSYSEVGCFQHLYTRENGTICYSNINRILTDAHTQANLLYRRRNGVTSVDFDKKGIYLASVTRSGCLTVHDFEALYCRTNKLTCLQEDESKLLLHLSPDHQLDVVKWNPLDQNEVLCASMKRNVLLIFDVAYMMSEPIDELRTRNTATVSGSNIPKGLSDVAFASNDSRIFASDTHGTVNVWDRRAKGLPCLELTSASFGTLNSIQLDAENQIVFGAGRHGIVYVWDIRGGRASTSFLTHKEICHPPLTSVKLATLLEKIGSLKAQAEIVPKEIHSIGLNPSFPNQLAFHIADGWSGILDIHNFKVTHIHCPPPAWLNDSYASLDQTDLRKPSWLSTCSIYLAGSPVNCGLHMLDFYPSISSPCHVDYKEDIPEFSSSTKQKNQNRFIPLTEEVLSCAAHPLYNAIVAGTKGTSLLVVSQKRKSCKGED 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02680 476 Gene3D - 59 316 IPR015943 GO:0005515
Vivi5g02680 476 SMART WD40_4 79 118 IPR001680 GO:0005515
Vivi5g02680 476 SMART WD40_4 189 230 IPR001680 GO:0005515
Vivi5g02680 476 SMART WD40_4 234 274 IPR001680 GO:0005515
Vivi5g02680 476 PANTHER MITOCHONDRIAL DIVISION PROTEIN 1-RELATED 85 465 - -
Vivi5g02680 476 SUPERFAMILY WD40 repeat-like 90 464 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02680 - - cam:101498313 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02680 5 112780194 112793667 Vivi5g02680 5 112780194 112793667 ECH