Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02555 ATGTCGGTGAATTTGAATTCAAGAGGGAGATCAGGAACCACTACCAGAGAAACCAGTCCAGAGAGAACCAAAGTTTGGATCGAACCAAAACCCAAAACGACCAGAAAAGTTTCCGTCGTTTACTACCTCTCCCGTAACGGCCAACTCCAACACCCTCACTTCATGGAAGTTCCTCTCTCTTCACCTCACGGACTCTATCTCAAAGATGTAATCATTCGCTTGAACTTGCTCCGTGGGAAAGCCATGGCTACTATGTACTCATGGTCATCTAAACGGAGTTATAAAAACGGTTTCGTTTGGCATGATTTATCGGAGAATGATTTCATATATCCAACGCAAGGTCAAGACTACATTCTCAAAGGATCTGAGATTCTCGATCATGTTGCTTCAACCACTCAAACGCCGTTTGAGGAAGAATCTGATTCTCCGGTGGTGATTACGCGGCGGCGCAACCAGTCGTGGAGTTCGATTGATTTAAATGAGTATCGAGTTTATAAGTCTGAATCGTTGGGTGACTCAGTTGGAAACATTGCCGCGGATGCGTCGACTCAGACGGAGGAGAAACGGAGGCGGAGAAGAGTTGTGAGAGAGAAGGAAGATGAAGATGAAGATGAGAAAGAGAAGAATGAAATTGAAAATGAAGAAGTTGAAACGGTCCCACACGTTGAATGTAATGAAAATCAGAGTACGGAGCTGAGTAGGGAAGAGATCTCGCCTCCACCGTCGGATTCGAGTCCGGAAACACTGGGAACACTTATGAAGGTAGATGGACGGCTGGGATTACGAACTGAGGTTATTGCGAAGGAGAATCCGACGGTTGAGAGCTGTCCTAGTGGAAGGATGAAAGCTTCGTCGGTACTCTTGCAATTGTTATCGTGTGGTGCGGTTTCTTTGAAGGAGAGTATGAGTAAAGATCAAGGGTTCTCATTGCTCGGGCACTACAAGTCTAGATTACCCCGCGGAGCAGGGAATCATAACAATGAGGGTAAAGAAGTAGGGACATTGATGGAAATTCCTGAATTGAGCAGGGTGAGATTGGAAGATAAAGAGTATTTTAGTGGAAGCTTGATTGAAACCAAAAAAGTGGAAACTCCTCTTGCATTCAAAAGGTCCTCTTCTTACAATGCTGATAGTGGTTCCCGGTTGCAAATCACGGAGCATGAAGAAGATACGGTGCGGGCAAAGTGCATACCAAGGAAATCCAAGACACTAGCAACAAAGAAAGAAGAGGGTGCTTCAAGTTCCATGGATAGAACTAGCCGTAGCCAACATGGAAGCAAAAGATTTGAGGGATAA 1296 0.4514 MSVNLNSRGRSGTTTRETSPERTKVWIEPKPKTTRKVSVVYYLSRNGQLQHPHFMEVPLSSPHGLYLKDVIIRLNLLRGKAMATMYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEILDHVASTTQTPFEEESDSPVVITRRRNQSWSSIDLNEYRVYKSESLGDSVGNIAADASTQTEEKRRRRRVVREKEDEDEDEKEKNEIENEEVETVPHVECNENQSTELSREEISPPPSDSSPETLGTLMKVDGRLGLRTEVIAKENPTVESCPSGRMKASSVLLQLLSCGAVSLKESMSKDQGFSLLGHYKSRLPRGAGNHNNEGKEVGTLMEIPELSRVRLEDKEYFSGSLIETKKVETPLAFKRSSSYNADSGSRLQITEHEEDTVRAKCIPRKSKTLATKKEEGASSSMDRTSRSQHGSKRFEG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02555 431 PIRSF UCP031043 5 422 IPR021182 -
Vivi5g02555 431 MobiDBLite consensus disorder prediction 385 431 - -
Vivi5g02555 431 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 14 423 IPR010369 -
Vivi5g02555 431 Pfam Protein SOSEKI, plant 37 134 IPR010369 -
Vivi5g02555 431 Pfam Protein SOSEKI, plant 136 378 IPR010369 -
Vivi5g02555 431 MobiDBLite consensus disorder prediction 176 250 - -
Vivi5g02555 431 MobiDBLite consensus disorder prediction 1 23 - -
Vivi5g02555 431 MobiDBLite consensus disorder prediction 183 202 - -
Vivi5g02555 431 Coils Coil 194 217 - -
Vivi5g02555 431 MobiDBLite consensus disorder prediction 222 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02555 Vivi-Chr5 107898467 107902013 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02555 - - gmx:100803283 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02555 5 107898467 107902013 Vivi5g02555 5 107898467 107902013 ECH