Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02527 ATGAAAGGAATAGACATGTTCTGTTCTTCCCCAGCTTCAACAGCAATAATACATACTACAATAGATCAACGTTCCATGCTACGTCAAAGCAAAAGCACCAAAACCTACGATCATGATAGAAGGAAAAACAAAAATCAACTTCATCAAGTTCCTTGTTTATCTCAATTACCTATCAATCCTATACCTTTCTTTGAGAAACATAGAAAGAGTTCATCTTCAGCAGATAAACAAAAAAGTACTACTGATCTCACACGTAGAAAAAGCTCCGTTGATTCGTCTTCGCAAAGATATCTTCTTGATGATACGCCGTTCATCGATTGGGTATCTGAATCCAACAAAATATTGGTTCCTCAGCTTAATGTTAAAGACATGTCTAATGATACAAAAACATTGAAAAGAAACGATTCTCATGCTCTTACTATTAGCTCCACTTCATCAGCTAATTCCTCCAAGGACCAGGTTGTGGTTTTGAGGGTGTCATTGCACTGCAAAGCCTGTGAAGGAAAAGTCAGAAAACATATCTCAAAAATGCAAGGAGTGAGATCATTCAGTATAGAAATGGAGAAAAAGAAAGTAACAATAATTGGAGACGTGACGCCATTAGGTGTACTGACAAGTGTATCCAAGGTGAAAAGTGCACAGCTATGGCAGTCTACAACATCAGCAGTATCATCATCTTCTTCTAAGATACACTAA 696 0.3721 MKGIDMFCSSPASTAIIHTTIDQRSMLRQSKSTKTYDHDRRKNKNQLHQVPCLSQLPINPIPFFEKHRKSSSSADKQKSTTDLTRRKSSVDSSSQRYLLDDTPFIDWVSESNKILVPQLNVKDMSNDTKTLKRNDSHALTISSTSSANSSKDQVVVLRVSLHCKACEGKVRKHISKMQGVRSFSIEMEKKKVTIIGDVTPLGVLTSVSKVKSAQLWQSTTSAVSSSSSKIH 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02527 231 MobiDBLite consensus disorder prediction 31 46 - -
Vivi5g02527 231 Pfam Heavy-metal-associated domain 157 202 IPR006121 GO:0046872
Vivi5g02527 231 SUPERFAMILY HMA, heavy metal-associated domain 153 210 IPR036163 GO:0046872
Vivi5g02527 231 MobiDBLite consensus disorder prediction 68 85 - -
Vivi5g02527 231 CDD HMA 156 213 IPR006121 GO:0046872
Vivi5g02527 231 MobiDBLite consensus disorder prediction 25 48 - -
Vivi5g02527 231 Gene3D - 147 221 - -
Vivi5g02527 231 ProSiteProfiles Heavy-metal-associated domain profile. 152 218 IPR006121 GO:0046872
Vivi5g02527 231 MobiDBLite consensus disorder prediction 65 92 - -
Vivi5g02527 231 PANTHER OS08G0405700 PROTEIN 6 228 IPR044526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02527 Vivi-Chr5 106972561 106973857 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02527 - - mtr:25492466 291.582