Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02432 ATGCTTAGAACAAGAATCAACACAGCACGCTCCATTTTTTCATCTCTTTTCAGAATCAATTCTTCTAACTATTCCACTTCCTTCCTCTTCGACGACACACAGATTCAGTTTAAAGAGAGTGTTGCTCAATTTGCTAATGAAAATATTGCTCCTCATGCTTCCAAAATTGACCATACTAACTATTTCCCACAGGAGGTTAACTTGTGGAAAAGTATGGGAGAATTTAATCTCCATGGGATTACTGTACCAGAGGAGTATGGAGGGCTTGGTCTAGGTTACTTGTATCATTGTATTGCAATGGAAGAGATTAGCCGTGCTTCAGGATCGGTTGGTCTTTCTTATGGTGCTCATTCTAACCTATGTATCAATCAACTGGTGAGGAATGGAAACCATGCTCAGAAAGAGAAATACTTGCCAAAGCTTATCTCCGGGGATCACGTTGGAGCTTTGGCAATGAGTGAACCCAATTCTGGGTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGACGGGGGATATGTGATTAATGGTAACAAGATGTGGTGTACGAATGGGACAGTTGCTCAAACATTAGTTGTCTATGCAAAAACAGACATAACAGCAGGGTCAAAAGGAATCACCGCATTCATCATCGAGAAGGGAATGCCGGGATTCAGTACTGCGCAGAAATTGGATAAACTAGGGATGCGAGGAAGTGATACATGTGAACTTGTCTTTGAGAATTGCTTTGTTCCAGACGAAAATGTTCTCGGGAAAGAAGGGAAAGGAGTCTATGTCATGATGTCGGGGTTGGATCTGGAAAGACTTGTTTTAGCAGGAGGTCCCCTTGGTATTATGCAGGCATGTCTCGATGTTGTCCTTCCTTATACTCGACAAAGAGAGCAGTTTGGTCATCCAATCGGGGAGTTTCAATTTATACAGGGAAAAGTTGCCGACATGTATACGTCTTTACAGTCCTCAAGGTCTTACGTGTATTCTGTAGCTCGGGACTGTGACAACGGAAAAGTTGACCCGAAGGATTGTGCTGGAGTTATACTTTGTGCAGCTGAAAGAGCGACACAGGTTGCTTTGCAGGCGATACAGTGTTTAGGTGGGAACGGCTACGTGAATGAATATCCAACCGGTCGTCTCCTAAGAGACGCTAAACTCTATGAAATCGGAGCCGGAACAAGTGAGATCAGAAGAATGATTATTGGACGCGAGCTCTTCAAGGAGCAATGA 1227 0.4352 MLRTRINTARSIFSSLFRINSSNYSTSFLFDDTQIQFKESVAQFANENIAPHASKIDHTNYFPQEVNLWKSMGEFNLHGITVPEEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRNGNHAQKEKYLPKLISGDHVGALAMSEPNSGSDVVSMKCKADRVDGGYVINGNKMWCTNGTVAQTLVVYAKTDITAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPDENVLGKEGKGVYVMMSGLDLERLVLAGGPLGIMQACLDVVLPYTRQREQFGHPIGEFQFIQGKVADMYTSLQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGTSEIRRMIIGRELFKEQ 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02432 408 FunFam Isovaleryl-CoA dehydrogenase, mitochondrial 23 146 - -
Vivi5g02432 408 ProSitePatterns Acyl-CoA dehydrogenases signature 1. 151 163 IPR006089 GO:0003995
Vivi5g02432 408 Gene3D - 20 146 IPR037069 GO:0016627|GO:0050660
Vivi5g02432 408 Pfam Acyl-CoA dehydrogenase, middle domain 149 244 IPR006091 GO:0016627
Vivi5g02432 408 PANTHER ACYL-COA DEHYDROGENASE 28 407 - -
Vivi5g02432 408 Pfam Acyl-CoA dehydrogenase, N-terminal domain 32 145 IPR013786 GO:0016627|GO:0050660
Vivi5g02432 408 CDD IVD 30 406 IPR034183 GO:0003995
Vivi5g02432 408 Gene3D - 261 404 - -
Vivi5g02432 408 Gene3D - 148 260 IPR046373 GO:0016627
Vivi5g02432 408 PIRSF PIGM 158 408 - -
Vivi5g02432 408 PIRSF PIGM 28 122 - -
Vivi5g02432 408 FunFam Isovaleryl-CoA dehydrogenase, mitochondrial 148 261 - -
Vivi5g02432 408 FunFam isovaleryl-CoA dehydrogenase, mitochondrial 262 406 - -
Vivi5g02432 408 ProSitePatterns Acyl-CoA dehydrogenases signature 2. 363 382 IPR006089 GO:0003995
Vivi5g02432 408 Pfam Acyl-CoA dehydrogenase, C-terminal domain 256 404 IPR009075 GO:0016627
Vivi5g02432 408 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 23 267 IPR009100 GO:0016627
Vivi5g02432 408 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 254 406 IPR036250 GO:0016627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02432 Vivi-Chr5 103149034 103152142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02432 31 408 Acyl Lipid Metabolism Gene Families AT3G45300 88.095 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02432 K00253 - gmx:100794259 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02432 5 103149034 103152142 Vivi5g02432 5 103149034 103152142 ECH