Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02422 ATGGTTAGAATTCAATATCTTTTATCATTGTCATTGGCAATACTAGTTTCTCTATTGTATTCCACAACCACTACTTTATCTCAATTATCTCCTGCTAATGCTCCTATACAACCTACACTTCCAGCTCCAACCCAACCAGCTGCTGCCCCTAAACCATTGGTACCTTCCTTACCAGACTCACCTACTGACTCCACTCCTGACACTGCAGGCAGCGTCGACATCGTCGGAATCCTGAGAAAGGCAAAGTCATTCAATGTCTTAATCAGACTCATGAAAACAACTCAATTGATCAACCAACTCAATTCGCAACTATTGACTACAAAAACAGGCGGATTAACAATTCTTGCACCAGATGACAGCGCGTTCTCAGAACTCAAAGCAGGATTCCTCAACTCTCTTTCTGATGGACAGAAACTCGAGCTCTTACAGTTCCACGTTATTTCTGATTACGTATCAAGCTCTAATTTTGATATTCTAACCAACCCTGTGAGAACACTTGCCGGAGCTAAACCAGGAAAGGTGGAACTGAATGTTGTGAGTTACGGTGGAAGTGTGAACATATCAACAGGTGAAGTGAACACTACAATCAATGGCATTATATATACCGATAAACATCTTGCTATATATAAAGTTGGCAAGGTGCTTCTCCCAATGGAATTCTTTTCCGTTGCAAAGGCACCTGCAAAAGGACCATCTTTGGCACCAGAACCTTCAACTGATACAGCAAAGTCGCCTAAACCTGATAAAGATATATCCTCAGACTCGTCGCAGGTGGTTAATCCAAAGGAACAGAATTCTGGCTCTGTGAAGATTGTGTACGGGAAGTGTGTGTCTTTTGGACTTATAATAGCTATGGCAGCGATGATGCTAACTTGA 876 0.4201 MVRIQYLLSLSLAILVSLLYSTTTTLSQLSPANAPIQPTLPAPTQPAAAPKPLVPSLPDSPTDSTPDTAGSVDIVGILRKAKSFNVLIRLMKTTQLINQLNSQLLTTKTGGLTILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDILTNPVRTLAGAKPGKVELNVVSYGGSVNISTGEVNTTINGIIYTDKHLAIYKVGKVLLPMEFFSVAKAPAKGPSLAPEPSTDTAKSPKPDKDISSDSSQVVNPKEQNSGSVKIVYGKCVSFGLIIAMAAMMLT 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02422 291 MobiDBLite consensus disorder prediction 37 68 - -
Vivi5g02422 291 Pfam Fasciclin domain 83 217 IPR000782 -
Vivi5g02422 291 ProSiteProfiles FAS1/BIgH3 domain profile. 71 206 IPR000782 -
Vivi5g02422 291 FunFam Fasciclin-like arabinogalactan protein 11 56 217 - -
Vivi5g02422 291 MobiDBLite consensus disorder prediction 229 262 - -
Vivi5g02422 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 270 IPR045003 -
Vivi5g02422 291 Gene3D FAS1 domain 54 217 IPR036378 -
Vivi5g02422 291 SMART fasc_3 113 218 IPR000782 -
Vivi5g02422 291 MobiDBLite consensus disorder prediction 37 59 - -
Vivi5g02422 291 SUPERFAMILY FAS1 domain 68 218 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02422 Vivi-Chr5 102612144 102613235 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02422 - - gmx:100819833 378.252