Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02418 ATGATGAAGCATTCTTTCTTCTCTCTCACACTTCTTCTAATGGTTTTTGTCTCTTCCACTACAATTCTAGCTCAAAAATCACCTGCTCCGGCACCATCCACTGATTCACCCCCGACCGACATTATTCGAATCCTCAAAAAGGCCGGAGGGTACACCACGCTAATCCGTCTTCTCAAGACGACACAAGTATCCACCCAAATCAACTCTCAACTCTTAAACTCGAACGGCGGTTTGACCTTGTTTGCAGCGAACGATAATGCTTTTTCAAGCCTTAAACCGGGTTTCCTCAATTCGCTTAGCGATGAACAAAAGAACAAACTCATCCAATTCCACTTGCTACCTACATTTGTAGCAATATCGAATTTCGACACTCTTAGCAACCCGGTAAGAACACAGGCGGGTGATGATCCGTATAGGTTGGCGCTGAATGTAACAAGTTCAGGAAACCAAGTGAACATAACGACCGGCATTGTTAATGTCACGGTTGGTGGAACTGTTTACACCGATCACCAGCTCGCGGTTTACCAGGTCGACAAGGTGCTCCTTCCTCGGGACTTCTTTGTTGCTAAGCCTCCTGCACCGGCTCCAGCGCCTGAAAAGGCGAAGACATCGTCTAAGAAGAAATCTACTGACAGCGCCGAAGTTCCAAGCGGAAACGATGATTCTGGCGCTTTTACTGTGAAACAGCGGCGTCTGATGTTGGTTCCTGTTGCATTTGCTACAATGATAGTAGCATTACTTTCAGGGTGA 750 0.4667 MMKHSFFSLTLLLMVFVSSTTILAQKSPAPAPSTDSPPTDIIRILKKAGGYTTLIRLLKTTQVSTQINSQLLNSNGGLTLFAANDNAFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVAISNFDTLSNPVRTQAGDDPYRLALNVTSSGNQVNITTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKAKTSSKKKSTDSAEVPSGNDDSGAFTVKQRRLMLVPVAFATMIVALLSG 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02418 249 MobiDBLite consensus disorder prediction 192 222 - -
Vivi5g02418 249 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 227 IPR045003 -
Vivi5g02418 249 SMART fasc_3 79 184 IPR000782 -
Vivi5g02418 249 Pfam Fasciclin domain 50 183 IPR000782 -
Vivi5g02418 249 SUPERFAMILY FAS1 domain 36 184 IPR036378 -
Vivi5g02418 249 Gene3D FAS1 domain 14 184 IPR036378 -
Vivi5g02418 249 ProSiteProfiles FAS1/BIgH3 domain profile. 38 181 IPR000782 -
Vivi5g02418 249 FunFam Fasciclin-like arabinogalactan protein 11 18 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02418 Vivi-Chr5 102452614 102453713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02418 - - psat:127107944 394.815