Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02409 ATGAGATTGACACAGGTTGTGTTGGTTTTGCTTTGGTTTCTTGGTGTTTATGCTCCTGCTTGTTTTTGTGCCAATGTTACCTATGATCATAGAGCATTGGTTATTGATGGCAAACGAAGGGTCCTCATTTCTGGTTCCGTTCATTATCCTCGTAGCACTCCACAGATGTGGCCGGACCTTATTCAGAAATCCAAAGATGGAGGAATTGATGTCATTGAGACTTATGTTTTCTGGAACTTACACGAACCCGTTCGAGGCCAGTATAATTTTGAAGGTAGGGGGGATTTGGTTGGATTTGTGAAGGCAGTTGCAACAGCAGGTCTATATGTTCATCTCCGGATCGGTCCTTACGCGTGTGCGGAATGGAATTATGGTGGCTTCCCTCTTTGGTTGCATTTTATTCCGGGGATTAAGTTCAGAACTGATAATGAACCATTCAAGGCAGAAATGAAGCGGTTTACTGCGAAGATTGTGGACTTGATGAAGCGAGAGAAGCTCTATGCATCACAAGGAGGACCAATCATTTTATCTCAGATTGAAAATGAGTATGGAAACGTTGATATACACTATGGTCCTGCTGGTAAATCTTACATCAATTGGGCAGCATCAATAGCTACATCTCTTGATACAGGTGTTCCCTGGGTTATGTGCCAGCAAGTAAACGCGCCTGATCCAATTATTAACGCGTGCAATGGATTTTACTGTGATCAATTCACGCCAAACTCAGACAAGAAACCGAAAACTTGGACTGAGAATTATAGTGGATGGTTTTTTGCATTTGGAGAGGCTGTGCCTTATAGACCTGTGGAAGATCTTGCATTTGCTGTGGCACGCTTTTTTCAGCGTGGTGGAACTTTTCAGAATTACTACATGTACCATGGAGGGACTAACTTTGGCCGGACAACTGGCGGACCGTTCGTTTCCACTAGTTATGATTATGATGCACCCATTGATGAGTACGGAATAATTAGACAGCCCAAATGGGGTCATCTTAAAGATTTGCATAAGGCCATAAAGCTTTGTGAAGAAGCATTGATAGCTACTGATCCAACAATTACATCTCCGGGTCCAAATCTAGAGACTGCAGTTTACAAGACAGGAGATGTATGTGTCGCCTTCCTTGCTAACATCGGTATGACCGATTCAACGGTAACTTTTAATGGCAATTCATATCATTTGCCTGGATGGTCTGTGAGCATCTTGCCAGATTGCAGAAGTGTTATTCTTAATACTGCAAAGATTAATTCCATGTCTATGACTTCAAGCTTTGCAACTGAATCTTTAAAAGAAGAGGTTGATTCTTTGGACAGTTCAAGTTCGAGATGGAGTTGGATTAGTGAACCAGTCGGTATTTCAAAGCCTGATGCATTCTCAAAATATGGACTACTTGAACAAATAAACACGACGGCCGATAGAAGTGACTACTTGTGGTACTCATTAAGCATTGTTGTTGAAGATAATGCTGGTGCTCAACCTGTTCTTCACATTAAATCCCTTGGTCATGCCCTTCATGCTTTTATAAACGGAAAACTTGCAGGTAGTGGAACAGGAAACAAAGGAAAGGCTAAGGTGAAGGTGGACATCCCTATTACACTTGTAGCTGGAAAGAACACAATTGATCTCCTTAGTTTAACAGTGGGATTACAGAACTATGGAGCATTTTATGACAGAGTGGGCGCAGGGATCACTGGTCCGGTAATATTGAAAGGTTTAAAAAATGGCAGTACCATCGATCTCTCGTCCCATCGGTGGACATATCAGGTTGGACTTCAAGGTGAAGATTTAGGTCTGTCTAGTGGAAGTGTTGGACAGTGGAATTCACAATCCACCTTACCTACAAATCAACCTTTAACTTGGTACAAGACGAAATTTGTTGCCCCTTCTGGAAGAAACCCGGTTGCAATTGACTTCACGGGGATGGGAAAAGGCGAAGCTTGGGTGAACGGACAGAGCATTGGGCGATACTGGCCTACATACATCGCTTCAAAATCTGGTTGTACTGACTCATGCAATTATAGAGGATCCTATAATTCATCCAAATGTCTCAAAAACTGTGGAAAACCATCACAGACATTATAG 2079 0.4233 MRLTQVVLVLLWFLGVYAPACFCANVTYDHRALVIDGKRRVLISGSVHYPRSTPQMWPDLIQKSKDGGIDVIETYVFWNLHEPVRGQYNFEGRGDLVGFVKAVATAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMKRFTAKIVDLMKREKLYASQGGPIILSQIENEYGNVDIHYGPAGKSYINWAASIATSLDTGVPWVMCQQVNAPDPIINACNGFYCDQFTPNSDKKPKTWTENYSGWFFAFGEAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFGRTTGGPFVSTSYDYDAPIDEYGIIRQPKWGHLKDLHKAIKLCEEALIATDPTITSPGPNLETAVYKTGDVCVAFLANIGMTDSTVTFNGNSYHLPGWSVSILPDCRSVILNTAKINSMSMTSSFATESLKEEVDSLDSSSSRWSWISEPVGISKPDAFSKYGLLEQINTTADRSDYLWYSLSIVVEDNAGAQPVLHIKSLGHALHAFINGKLAGSGTGNKGKAKVKVDIPITLVAGKNTIDLLSLTVGLQNYGAFYDRVGAGITGPVILKGLKNGSTIDLSSHRWTYQVGLQGEDLGLSSGSVGQWNSQSTLPTNQPLTWYKTKFVAPSGRNPVAIDFTGMGKGEAWVNGQSIGRYWPTYIASKSGCTDSCNYRGSYNSSKCLKNCGKPSQTL 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02409 692 Gene3D - 585 678 - -
Vivi5g02409 692 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Vivi5g02409 692 FunFam Beta-galactosidase 416 570 - -
Vivi5g02409 692 FunFam Beta-galactosidase 22 341 - -
Vivi5g02409 692 SUPERFAMILY Galactose-binding domain-like 583 658 IPR008979 -
Vivi5g02409 692 FunFam Beta-galactosidase 290 415 - -
Vivi5g02409 692 SUPERFAMILY (Trans)glycosidases 26 342 IPR017853 -
Vivi5g02409 692 SUPERFAMILY Galactose-binding domain-like 398 571 IPR008979 -
Vivi5g02409 692 Gene3D Glycosidases 21 341 - -
Vivi5g02409 692 PANTHER BETA-GALACTOSIDASE RELATED 16 692 IPR001944 GO:0004553|GO:0005975
Vivi5g02409 692 Pfam Beta-sandwich domain in beta galactosidase 345 414 IPR041392 -
Vivi5g02409 692 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Vivi5g02409 692 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Vivi5g02409 692 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Vivi5g02409 692 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Vivi5g02409 692 PRINTS Glycosyl hydrolase family 35 signature 615 629 IPR001944 GO:0004553|GO:0005975
Vivi5g02409 692 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Vivi5g02409 692 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Vivi5g02409 692 PRINTS Glycosyl hydrolase family 35 signature 642 658 IPR001944 GO:0004553|GO:0005975
Vivi5g02409 692 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Vivi5g02409 692 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Vivi5g02409 692 Gene3D - 412 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02409 Vivi-Chr5 102143114 102156185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02409 20 692 Glycoside Hydrolase AT2G28470 73.971 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02409 - - gmx:100793198 1236.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02409 5 102143114 102156185 Vivi5g02409 5 102143114 102156185 ECH