Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02374 ATGAGTTCTAGTCGAAATTCGACGTCGAGAAGTAGAGATTCCTTGGAAGGAATGTTGAATGACTATGTTGCTGGAAAGACAAAAATGAAGCCTCAAAAAGCTGTCACCTCAAAATTTGTTGCAGCACTAACATGTCTTCAATTTTTCTTCGCAGTTTACGCAACGTTTTTATTGTATTACATGGGTCCTTCGATCGATTTAAGAACCAAACCCGATTTTTCAAGAATCGCGCAACATTGGAAGAACCTCATGATCACGCCACACATTGTAGGACATTACCAAGAATCATCTTCTTCACTCATCCAAGAAGAGAACATCAATCAACTTCCGTCGCTTGTTTGCGAGAACGAGAAAATAGATTTCTTGCAGAAGAAGTCAAATGATGTTCAAATGATTAAGCTAAAGAGAGAGCTTTATGAAGACGTTTTGAGTTTCCAAAACAAAACCATTGGCACCGAGACGCTTCAAGAGCTTATGAAGATGAAATCCGAATGGGACTTAAACGCGCCGAATCCTAAAAAGCCGAAAATCAATGTTTTGTTAAACCACTTCAAGAGAAAAACACTTTGTGCACAGCTTGATTCATTGCTTCAACAAACACTTCCTTTTCATCAAGTTTGGGTGCTTTCGTTCGGGAGTCCAAACGAGGCGTCGTTGAAGAGAATCGTGGAAAGCTATAACGACACGAGGATCAGTTTCATAAGTTCGAGTTACGATTTCAAGTACTACGGAAGGTTTCAAATGGCATTACAAACAGAAGCTGATTTGGTTTACATTGTGGATGATGATATGATACCTGGAAAGAAAATGTTGGAGATTTTGGCGCATGTTGCGGGGACCGAAAAGTATAAGAATTCGGTTTTGGGAAGTATTGGGAGGATATTGCCATTTAGACAGAAGGATTTTACTTTTCCAAGTTATAGGAAGTTTAAGTCTAGAGAAGCTGGTTTGTATTTGCCTGATCCTGCTTATGATATCACTATTGAGAAAATTGTGCAGGTTGATTTTCTTTCAAGCTCTTGGTTTTTATCTGCTGAACTTGTTAAGACACTTTTCATTGAAACTCCTTTTACTTTCTCTACTGGTGAAGATCTACACCTAAGTTATCAGCTTCAGAAGTATAGAAATGCAGGGTCATTTGTTCTACCAGTAGATCCAAAAGACAAAGAAACATGGGGTGATAGGGAGCACAGGCTAGCCTATGTATCAGAAACCACAGTAATTTTCAAAGACATAGTTCAAGTAAGAGATGATCAATGGTGGAAAGCACTTTCATCAGGCTACATAACACAATGGGCAGCAATGTATCCACAAAAAATCGATGCACTCTTTTACGCTCATTCGGTCGACGAAGTAAAAGCACTTTCACCGCTTCTCGAAAAATTCAGGTCCACAGTTGGCAAAAAGGCCTACATGGTTGTCTCTGGTGGAAACTTCTGTCCTTGTGAGCATGCTGCAGCAGCTCTCAAATGGCCTTTGGTGGTTTGCAAAGAACGTCGGTTTAAGATCTTTGATTTGGGCGTTGGATCGCTTTCTGGCGTGTCGAATTCGGAGGCGCCGGTTATACAAGCTGTGTATTCTAGTTTGAAGGGTTTGATTAAAATTCATAACCCAAGTGTTGTTATAACTGTGGATGATATTGATGTTAATGTGAGAAAGGCTTTGAAGATGGCTTCTGAGGCTAATTCCAATGGTACTACATTGGTTCTTTTGCCTAGGGCTTCTGTTTCTAAAGTTCTTTGGATGGCTGATCTTAGATCAACAGCATTGCCAAATTGGAACAAGATGAGCCTTTCCATCAACATCATAACCCAAAACAGGGTAAACTCCCTATCAAGGCTTCTAAAATCTCTCACCAATGCCTACTATCTAGGAGATGAAATCCCAATCACCTTCAACATGGACAGCAAAGTTGATGAATCAACAATCAAACTAGTAGGTTCATTTCATTGGCCACATGGCCCCAAAACACTAAGAAGAAGAATCATCCAAGGGGGTCTCATAAGAGCTGTAAGTGAAAGCTGGTATCCATCTTCAGATGACAACTTTGGCTTACTCCTTGAAGATGATATTGAAGTCTCACCTTATTACTATCTATGGATCAAATATGCACTCATGAATTACCATTATGACCCTCAAGTTTCTCTCCCAGAACTCTCTTCAATCTCTCTCTACACACCAAAGATTGTTGAAGTTGTCAAAGAGAGACCTAAATGGAATGCAACAGACTTCTTCAAACAAATCCATCCCAACACACCTTACCTTCACCAACTCCCATGCAGTTGGGGAGCAGTGTTCTTCCCTAAACACTGGAGAGAGTTTTATGTTTACATGAACATGCGGTTCACCGAGGACGCGAAGAAAAACCCGGTCCAAATACCGAAGTCACGAACGAACGGTTGGCAAGCTTCATGGAAGAAATTCCTCATTGACATGATGTATTTAAGAGGGTATGTAAGTCTCTATCCAAATTTCCCAAACCAAGCTAGCTTTTCAACTAACCATATGGAACCTGGTGCACATATAAGTGCAAAAGACAATGTGGTTAAGCATGATAAAACGGATTTTGAGGTTCCATTGTTGAAAGATGATTTCAGAAACTTTTTGCCTGGAATGAAAATGCCTTCGGCGTCGAGGCTACCGTCGTTGAATCTTTTTAATCAGGCTGTTTCTCTTAAGGGTCTTAAGGCTGCTGGTGCTAAGCTGGGACAGGATGTGCTTAAATGTGATAATGCTACTGAGGTTGTTGCTGTTGATCATGGTACTGGTTTGCCACACCATTGCTCTAAATTCTGA 2796 0.4049 MSSSRNSTSRSRDSLEGMLNDYVAGKTKMKPQKAVTSKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTKPDFSRIAQHWKNLMITPHIVGHYQESSSSLIQEENINQLPSLVCENEKIDFLQKKSNDVQMIKLKRELYEDVLSFQNKTIGTETLQELMKMKSEWDLNAPNPKKPKINVLLNHFKRKTLCAQLDSLLQQTLPFHQVWVLSFGSPNEASLKRIVESYNDTRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLEILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFKSREAGLYLPDPAYDITIEKIVQVDFLSSSWFLSAELVKTLFIETPFTFSTGEDLHLSYQLQKYRNAGSFVLPVDPKDKETWGDREHRLAYVSETTVIFKDIVQVRDDQWWKALSSGYITQWAAMYPQKIDALFYAHSVDEVKALSPLLEKFRSTVGKKAYMVVSGGNFCPCEHAAAALKWPLVVCKERRFKIFDLGVGSLSGVSNSEAPVIQAVYSSLKGLIKIHNPSVVITVDDIDVNVRKALKMASEANSNGTTLVLLPRASVSKVLWMADLRSTALPNWNKMSLSINIITQNRVNSLSRLLKSLTNAYYLGDEIPITFNMDSKVDESTIKLVGSFHWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDNFGLLLEDDIEVSPYYYLWIKYALMNYHYDPQVSLPELSSISLYTPKIVEVVKERPKWNATDFFKQIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKKNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQASFSTNHMEPGAHISAKDNVVKHDKTDFEVPLLKDDFRNFLPGMKMPSASRLPSLNLFNQAVSLKGLKAAGAKLGQDVLKCDNATEVVAVDHGTGLPHHCSKF 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02374 931 SUPERFAMILY Nucleotide-diphospho-sugar transferases 171 374 IPR029044 -
Vivi5g02374 931 CDD Glyco_tranf_GTA_type 187 278 - -
Vivi5g02374 931 PANTHER OSJNBA0004B13.7 PROTEIN 279 922 - -
Vivi5g02374 931 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 598 846 IPR029044 -
Vivi5g02374 931 SUPERFAMILY Nucleotide-diphospho-sugar transferases 595 787 IPR029044 -
Vivi5g02374 931 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 153 385 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02374 Vivi-Chr5 100746198 100751201 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02374 - - gmx:100790938 1646.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02374 5 100746198 100751201 Vivi5g02374 5 100746198 100751201 ECH