Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02342 ATGGTGTCAAGTCCTTCTTCATCCGAGAATCACAAGAAAACGAAATCATCACCATCAACAACGCCGAGTCCTTTGAGGAGATCTGAGAGACAGCGAAACCTTTCATCTAATTCAAATCGTTCACCTTCTACTTCTACAGCCACCGTTTCGAAGTCTGAGTCTAAAGATAAAGACGAGAAAAGTTCTTCGAATAGGAAGAAACTGGATGCTCGGAGGTATCGAAATATTTTAGCACAAAAGAAAAATAAAGATTGCCACAAGGAGACAAATGATGAGCATAAGTTGACTCCAAAAGATAGCAACAAGGGTGAGAGCGAGATTGATGAGTGCCATGAAGGGATTAGTTTGAGTTGTAAAGAAGTTTTTGAGGATTGTATTAAGCCATCTGAAGATGGCAAAGCAAAGGATATGAGCACAAAGTCTATGTCGAAAGGACTTGTGAAAGAACCATTAGAAAATAATGTGACAATAGGTTCAACGGTGGTAGCATCTAATTCCACTTCTCAAAGGACTAGTGAGATACCTGAAAGAGTTAATTTAGATAGCGATGAAGAGGAGATTAGGGGTTCAGATTCAAATGGAAGTTTGATTAGGAAATGCGTTGGAAATGATAAGGGTGGAAATTTGACACCTTCCCAAAGAAAAAGCACGGAGGTAGACATTGAGAATTTGACACCTTCTAAAAGAAAAAGCACGGTCGTAGACATGCACTCTGATGTTTCTCATACCTTGGATGCCGACCATGAAAGGCTTCGCGTCAATATTTTAGAGACCAGTGGGCCTTCCAAAAGGATAAGGGGGATCAATAATGTTGATCAACCTACTTCAAAATCTAATGATGAAAAGTCATGTACCAAAAACAAGGAAGAGAGACCTCAAGGGAACAATGATGAATCTGAGAAGATAAGGACACAGCAGAGGAGCTTACATCTTTCAGTGAAGCCAGAGATAGAAAAGCTTTGTGAAATTCTTCTTCTCCCAGATAATGTCAAGTGTATGGTTGGAAAGTTTCTTGAATATACCATGAACAATTATATGATCTGTACAGAACCAGTATCAATATTACAGGCTTTTCAATTATCTCTGTGTTTGACTGCTGCTTCGTTGCTAAGCCACAAACTTGACTCTGAAGCTGCCCTCATTCTTGCAAAGCGGCACTTGAATTTTTCCTGTAAGAAAGATGCGGTTGATGAAATTAGTGCAATGCTGTGGGATCTGAAGGACAATTTTTTATTACTCACAGGAGACTCTAATGCCAATTGCTCTCCAAAGGTTTCGGAATCATCAAAAAGGGTTCATTCGGATACAGATACAACATCAGATGTTGAATTGACCAAAAAAGATATTTCCAAAATTTCTAGAAATATTAAAGTAAATCAGAATCGCAAAGAGCAATGGAGAAAGCTACTTCATATTCAACAGGAAAATAAACATAAGTTGGAAAAAGGTATTGAGAAAAAAATGACTGATTTTAAAAATATGTTTCATGTAGAGTGGCAAGCTACTTTACTTTATGCGAAGGAAAAAGTGAAGCTCAGAGAATTCAAAAGTAAATACAAAGTAAGGGAAGCAATATTGAAAAGGGAGCAAGAAGCACGTCTCAAGGCTCTTGAGGCCGAACAGTTAGAAGAAAGGCAGAAATTCCGTGAGTCGTCAAACCTAAGTTCTTCGAAGGAACTTGGGACATCCCATAATGCTCAAAAAATCCTTCTGTCTAATAAAGTGTCTGAAACTAGTTGCAAACTGGCGACTGCCAGTGAATTGAGTAGGAAGGAAGCTGTTGGATTGCCCAGCAAAGTCAGAAGTACTGATTATCCAGAGAATGCAGCTCCTCTGAATTCCTTATCCTCAGATCAAATATCTGATGAAGGTTTAGATGGGGTTGCATCACCTAGGCCTCGTAGCTCTTCTGGTCCAAGTAATGGCCATCCAGCTGCAGTTTCCCTTTTGAATTCACCATCTTCAATTCAAAAAGTTTCCGGTAGAGTCTCGCCGGCGGCCATAAGTGATGGACAAACGCCAGTCACGGGACCAGAATTGAGTGGGGATGCAGCCGTAGGATTGCCTAGCACAGTTAGAAGTACTGGTTATCCAGAGAATGCAGCTGCTCTGAATTCTTCACCAACAGATCAAATATCTGATGTAGGTTTAGATGGTGTTGCATCACCAACACCCTGTATATTTTCTAGTCCACCTGATGGTCTTCCAGCTACATCTTCCCTTTTGAATTCACCTTCTTCAAAGCAACAAGTTCCTGATAGAGTCTTGTCACCCATAACTGATGGACAAATACCAGTCGTAGTGCCAGAAAATAATCATGAAGAGGCTGAATGTCAATTAACAGATAACGTCGAAGTGAATGAGAGTACTACATCAAACTACCAGGACGGAGTAGACAGAACTATGGCAGAAAACACTTTGTCCCAGGAGACTTCAGTATCTAGAGCGGTGGATCCCATTGAGCCTCAAAAACAAGGGCCCGGGCAGCCATTATCAGCTGTAGAGTTACCCTCTATGGTCATGGAGCCTCCAGAGCAGGTGCAGCAATTACCTTCTTCAGGGTTCCTTTCATCCAACCAGGATATCTCTAACTTGCCTTCGGTGGCTGGAGGTGAAGATCAGCCAGCAACCAATGAAATTTTTTTCTCCAGCCAGATTCCCGAGGCATCAGCAGTGGTTCAAAATCAAGCCGCCGAGCAACCTGCCTTGAATTTGGAAGTTGATTCACATTCGCGTCAAGTTGTGCCTCCAGTCTCGGACATGGTCCTTGATTCACTTGCGCCTGGTGGAGTCACAACCCAGTCATTAGACACAAGAAATTTGTCAACTCACAGAATTATCAATAATCATCCTATTCAAACTCCAGCTCAATCAGCTTCAAGGAGTTTTCCATCTTTGTTTTATGATCCACTTAGTTATGAATTGGAAAGAATACGTAAATCGACAAAGCAAAATCTGAAAAACCATGAAGATATGAAATTACAGCTGAAATGTAATTTTGAGAAGGAAATTGAGGAACTTCGCAGGAAGTATGATATTCAAATGAAGGAGATTGAAGTTGAATTTCAGAAAACAAGCAAGAACTATGATACACAATATAAAACAGTTTATGTACATAAAATATTGGCCGATGCTATGAAGGCTAATTCTGATCCTAGGTTTTCTGGTGAGTCGGGAATGCTGCAAGGTTTAACCCAACTTCCAAGACCGCAAAATCCTACTCATCCCTTTCAGGTTGCCGGACCATCTTGCTGTGGGCCTCCTGTAACCACTTTCCAGAATTCACACGCCTCAACTGGCTCTCATGCTATGTTGCCATCACCTATGCACAATACACCGGGAAATTTCAGCGGTTTTTCTGCAAGACCACCTCATATCAATACTTCTTCACTTAATCTTCAAGCTGGTGGGGGGATATGTGCTCCTCCACTGCATCCGCCGCCTTATAGATCCTCAACATCTGTACCAGCCTCAAGTCTCATGGGGGAGTTCCGAGCCCCTCCACCTCCTCTCCACCCTTATAGACCCTCAATATCTGTACCAGCCTCCAGTCACAGTGGGGCGATGCCCACCCCTCTGCTTCCTATCCCGCCTTATAGAACCTCCACATCTGTGCCAGCCTCCAGTCACAGTGGAGCGATGCGCACCCCTCAACCTCCTCTCCCGCCTTATAGACCCTCAACATCTGTTCCAGCCTCCAGTCACAGTAGGGCAATGCGCACCTCTCCACCTCCTCTCCCACCTTATAGACCCTCAACATCTGTACCAGCCTCTGGTCACAGTAGTGCGATACGTGCCCCTGCACCGCATCTTCCGCCTTATAGACCCTCAACATCTGTACCAGCCTCCAGTCTCAGCGGGGAGATACGTGCCCCTGCACCGCATATACCGCCTTATAGACCCTCAACATCTCTACCACCCTCGACATCTGTACCAGCCTCCAGTCTTGGAGGAGTCTCTCAGATTGGTCCTCATAGGGGGCATGGGTATGAGAGCACAGATTCGGCATCTTTGAATCATTCCCAATTTAGCAAAAGTAGCAGCGTCCCGGTCAACTCAACCCAAGAAGCTACACCTTCTGATGTTGTCTGTTTATCAGATGATGACTAA 4110 0.4331 MVSSPSSSENHKKTKSSPSTTPSPLRRSERQRNLSSNSNRSPSTSTATVSKSESKDKDEKSSSNRKKLDARRYRNILAQKKNKDCHKETNDEHKLTPKDSNKGESEIDECHEGISLSCKEVFEDCIKPSEDGKAKDMSTKSMSKGLVKEPLENNVTIGSTVVASNSTSQRTSEIPERVNLDSDEEEIRGSDSNGSLIRKCVGNDKGGNLTPSQRKSTEVDIENLTPSKRKSTVVDMHSDVSHTLDADHERLRVNILETSGPSKRIRGINNVDQPTSKSNDEKSCTKNKEERPQGNNDESEKIRTQQRSLHLSVKPEIEKLCEILLLPDNVKCMVGKFLEYTMNNYMICTEPVSILQAFQLSLCLTAASLLSHKLDSEAALILAKRHLNFSCKKDAVDEISAMLWDLKDNFLLLTGDSNANCSPKVSESSKRVHSDTDTTSDVELTKKDISKISRNIKVNQNRKEQWRKLLHIQQENKHKLEKGIEKKMTDFKNMFHVEWQATLLYAKEKVKLREFKSKYKVREAILKREQEARLKALEAEQLEERQKFRESSNLSSSKELGTSHNAQKILLSNKVSETSCKLATASELSRKEAVGLPSKVRSTDYPENAAPLNSLSSDQISDEGLDGVASPRPRSSSGPSNGHPAAVSLLNSPSSIQKVSGRVSPAAISDGQTPVTGPELSGDAAVGLPSTVRSTGYPENAAALNSSPTDQISDVGLDGVASPTPCIFSSPPDGLPATSSLLNSPSSKQQVPDRVLSPITDGQIPVVVPENNHEEAECQLTDNVEVNESTTSNYQDGVDRTMAENTLSQETSVSRAVDPIEPQKQGPGQPLSAVELPSMVMEPPEQVQQLPSSGFLSSNQDISNLPSVAGGEDQPATNEIFFSSQIPEASAVVQNQAAEQPALNLEVDSHSRQVVPPVSDMVLDSLAPGGVTTQSLDTRNLSTHRIINNHPIQTPAQSASRSFPSLFYDPLSYELERIRKSTKQNLKNHEDMKLQLKCNFEKEIEELRRKYDIQMKEIEVEFQKTSKNYDTQYKTVYVHKILADAMKANSDPRFSGESGMLQGLTQLPRPQNPTHPFQVAGPSCCGPPVTTFQNSHASTGSHAMLPSPMHNTPGNFSGFSARPPHINTSSLNLQAGGGICAPPLHPPPYRSSTSVPASSLMGEFRAPPPPLHPYRPSISVPASSHSGAMPTPLLPIPPYRTSTSVPASSHSGAMRTPQPPLPPYRPSTSVPASSHSRAMRTSPPPLPPYRPSTSVPASGHSSAIRAPAPHLPPYRPSTSVPASSLSGEIRAPAPHIPPYRPSTSLPPSTSVPASSLGGVSQIGPHRGHGYESTDSASLNHSQFSKSSSVPVNSTQEATPSDVVCLSDDD 1369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02342 1369 Gene3D - 967 1049 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 206 220 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 51 108 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 263 278 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 607 623 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 1332 1361 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 1 108 - -
Vivi5g02342 1369 Coils Coil 979 1021 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 1138 1369 - -
Vivi5g02342 1369 PANTHER HELICASE PROTEIN MOM1 4 1212 IPR039322 GO:0031507
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 591 682 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 279 307 - -
Vivi5g02342 1369 Coils Coil 520 547 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 181 220 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 1201 1215 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 845 875 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 633 676 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 256 307 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 806 875 - -
Vivi5g02342 1369 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02342 Vivi-Chr5 99720742 99731688 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02342 - - vvo:131633484 2479.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02342 5 99720742 99731688 Vivi5g02342 5 99720742 99731688 ECH
Vivi2g07195 2 215164459 215180201 Vivi5g02342 5 99720742 99731688 PCT