Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02336 ATGTCCCACTCCTACCAGCACTCACAACCACAACAAAGACGGTTATCATCTCAATTCCTTCATCACAATCAACAATTTTTCAATATTATTTCTCCTCAAACGTCCCTCTCACCTTCTCATTCACTTCACAAACTCACTTCAACAACAACAACTACAACAAGTTTCTCTTTCTTTCACAACAAGCATTATCAAGATTATGAAGATGAAGAAAATGAACCTATTACTCCTCCATATACACTCCCTTGTTGCTTTAATATTCTTTCTCATTCTAAGCGATTCAAGTTTCATGTTTCTAACATGGATCATCATCTTCAACTAGATCATTTCTCATCCTTTAAATCTCCTTCTCAAATCATTGGAAAAAAGAAAAGTATTGGACTGCAAAAGAGAGAGGAACTTGAAAGAGAGGTCAATATGCTTCAAAGGTTGTTAGACCAAGAAGAAAAAGTTCATGAAATATTAGATATGGTGAATAATAGACCAAACAATTCAGCCATATCTATTCCCAATTTTCTTCCTCCTAAGATGAGAGAACTCTTGGCAGAGCTAGTCTTGGTTGAGAGTGAGATAGCTAAACTTGAATCTCAAATTAGCCAACTTCAAGCTGGTTTGAAACATGAAGAAGAAATCGCGAAGGAATCTAAGTCGAAAACGTGGAACCAAGGGAGTTTGATCAGCAATTCTTCTAACTACAATCATTTATCGACTTCGTCGGTTATAAACCCGAGTTCTGTTCAAAGAAGTAGTAGTAATATTCATGAAAGGATGGCATTTGAAACCAAAGCTTTGCATTTTATAAGTAAAGCTATAAAGGGTGATTATAATCTCAACGACTTCGGTCTTAACGAGAAAACAGGATTTTCTAAAAATTCTGTTGAACAGGAAGAAGTGAAGTTTCATGAAAGACTTATAAGAAAAAATGCAGCAGCGAAGCCTCCTTCGCCTATGCGAGACCCTCGTCATCCATCGCCTAAGCTGCGTGAACGGAATCTAGACATGTACTTAGATCTACCGACTAGATCACTACTTGATCCACTTCTATCAGAAGAGAATGATCTAAAGTGGCAGCCAAACAAGCTATCTGAAAGCATCATGAAGTGTTTGAACTTCATATATGTAAGACTACTAAGAACATCAAGAGCAATGGAATTGGAGAAATCAGGACCTGTTTCGAGGTCTTTGCATTCTTCTTTAAGCTCAAGAAGCTTCAGGGTCGATCCTGGATCGACCCCGAAACCAAGCTTTATGTTGCAGAAGGAATCAAGGCAACAAGATCCATACGGTATCTTTAATATAGAAGAGTCCATTCCAAGGGACATTGGTCCTTACAAGAACTTGGTTATGTTTACCTCGAGTTCTCTTGATCCGAAATTCATCTCAAGCCCTTCCTCTATTCCATTACTAAGAAAGCTAAGGATCTTAATGAGCAATCTTCAGACAGTTGATTTGAAAGGCCTAACAAATCAACAGAAATTAGCATTTTGGATCAACTTGTACAATGCTTGTATCATGCATGGATTCATCCAATATGGAGCTCCATCCACACCAGAAAAGTTAGTTGCATTGATGAACAAGGCCACCCTCAACATAGGAGGGAATATCATAAATGCTCAAGCTATAGAGCATTTTATTTTAAGGAAACGCGATACTTCTAATATGAAAGAGGCACAGAGAAAGGGAGAGTGGGAAGAGAAAGAATCGGTTGTACGCGAACTTTATGGACTAGAGTTTGTGGATCCTAATGTCACGTTCGCTCTTTGTAATGGAACTCGTTCTTCTCCGGCTGTGAGGATATACACAGGTGATGGTGTAACAACTGAGTTAGAGAAATCAAAGCTAGACTATTTTCAAGCTTCAATTCTGGCAACTAGCAACAAAAGGATAGGGTTTCCTGAACTTCTGCTCAGAAACATGCTTGATTTTGCTGTGGATATTGACTCACTGGTGGAGTGGGTGTGTAATCAGTTACCTACTTCAGGGACTTTAAGGAAATCAATGGTGGAATGCTTTAGGGGTCATAGTGGAAATGTCAAGGCCTCAAGTATTGTTGAGAAGATACCTTATGACTATGAATTTCAGTATTTGTTGACTATATAA 2097 0.3834 MSHSYQHSQPQQRRLSSQFLHHNQQFFNIISPQTSLSPSHSLHKLTSTTTTTTSFSFFHNKHYQDYEDEENEPITPPYTLPCCFNILSHSKRFKFHVSNMDHHLQLDHFSSFKSPSQIIGKKKSIGLQKREELEREVNMLQRLLDQEEKVHEILDMVNNRPNNSAISIPNFLPPKMRELLAELVLVESEIAKLESQISQLQAGLKHEEEIAKESKSKTWNQGSLISNSSNYNHLSTSSVINPSSVQRSSSNIHERMAFETKALHFISKAIKGDYNLNDFGLNEKTGFSKNSVEQEEVKFHERLIRKNAAAKPPSPMRDPRHPSPKLRERNLDMYLDLPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPVSRSLHSSLSSRSFRVDPGSTPKPSFMLQKESRQQDPYGIFNIEESIPRDIGPYKNLVMFTSSSLDPKFISSPSSIPLLRKLRILMSNLQTVDLKGLTNQQKLAFWINLYNACIMHGFIQYGAPSTPEKLVALMNKATLNIGGNIINAQAIEHFILRKRDTSNMKEAQRKGEWEEKESVVRELYGLEFVDPNVTFALCNGTRSSPAVRIYTGDGVTTELEKSKLDYFQASILATSNKRIGFPELLLRNMLDFAVDIDSLVEWVCNQLPTSGTLRKSMVECFRGHSGNVKASSIVEKIPYDYEFQYLLTI 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02336 698 Coils Coil 130 150 - -
Vivi5g02336 698 MobiDBLite consensus disorder prediction 306 326 - -
Vivi5g02336 698 Pfam Leucine-zipper of ternary complex factor MIP1 128 207 IPR025757 -
Vivi5g02336 698 Coils Coil 176 210 - -
Vivi5g02336 698 PANTHER EXPRESSED PROTEIN 124 697 - -
Vivi5g02336 698 Pfam Protein of unknown function, DUF547 484 615 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02336 Vivi-Chr5 99321416 99326037 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02336 - - gmx:100809848 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02336 5 99321416 99326037 Vivi5g02336 5 99321416 99326037 ECH